Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04265 ATGAACAACAAAAACAACAATAACACTACTCAAGCATGTGCTGCATGTAAATATCAACGTAGAAAATGTGCACCTGATTGCATTCTAGCACCTTATTTTCCTCATGATAGACAAAGACAATTCCTTAATGCACACAAATTATTTGGTGTTAGCAACATTAATAAAATCATTAAATTTCTTGACCCTCCTCTTAAGGATCAAGCCATGAGGACAATCATTTTTCAATCTGATATGCGGGCTAATGATCCCGTTGGTGGTTGTTATAAATATATTCAAGATCTTCAGGCTCAAATTGAATATTATAAAATAGAACTTGATCTTGTTCATCAACAACTCGCGATTTTTCGATCACAATCTCAACAACAACAACAAATACAGGTTAATTATGGTGATCAAGGTATTATGAATTCAGATTCATTGTTAGGTTTTTATAATCTTTCAGGATCTATTGCTTCGGGTACCGCGCCGGCTCATTATCATTACAATATTCAAGAACAAGTTGTGCCACAAGAACATGAGCATGAACAGGAACAAGAACAATACATTATGACTGAAGAAAGAAATAGTAGCAGTGTTAATACAACTCCTTTGCAACAACATAATAATAATTGGGGGGCTATTTCTCTATCATCTTTGTCATTGCATGGCCAAAGTAGTAATGCTAGTGATGAGTTTGATCATAAGCCAATTCTTGATATACCTTGTGATGAAAGAAATGAATTAGGTTTCGACTCCGAAGAAATACTTCACCACAGTGATGAAGTGGTTTTGTTTAAGATAGACGATGGATTGATTAAATCAGATGGTGACTACATTCAACAAACACAAGTTCAAGCTCAAGATCAAGATCATGATCTGAAAGGTGCAGCAACATTGTTTACTTTGACAAATTGTACCAGTTGA 903 0.3466 MNNKNNNNTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNINKIIKFLDPPLKDQAMRTIIFQSDMRANDPVGGCYKYIQDLQAQIEYYKIELDLVHQQLAIFRSQSQQQQQIQVNYGDQGIMNSDSLLGFYNLSGSIASGTAPAHYHYNIQEQVVPQEHEHEQEQEQYIMTEERNSSSVNTTPLQQHNNNWGAISLSSLSLHGQSSNASDEFDHKPILDIPCDERNELGFDSEEILHHSDEVVLFKIDDGLIKSDGDYIQQTQVQAQDQDHDLKGAATLFTLTNCTS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04265 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 181 - -
Mepo1g04265 300 Coils Coil 91 111 - -
Mepo1g04265 300 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Mepo1g04265 300 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04265 Mepo-Chr1 49991952 49993264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04265 11 121 AS2 family AT3G13850 75.676 3.58e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g04265 LOB 9e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04101 6 53209863 53211376 Mepo1g04265 1 49991952 49993264 PCT