Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04248 ATGGTCATTGGTCAATCTTTTATTGATACTAGGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAAATCATCGACGTATATTCGACAAACGCACCTTATAAGAGGAAGGTAAGCCCTACAAATGTTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGAAGAAAACAAGTACTAATGATGCCAATGGACCTAAGACCTGCAACTGTAAGAAGAGTAAATGTTTGAAACTTTACTGTGATTGTTTTGGTGTTGGAATCTTCTGTGGTGACGGTTGTGCTTGCGGAGGTTTTGGCAACAGAGTAGAATTTCAGGAGAAAGTTGTTGAAACAAAACAACAAATTGAATCCCCTAATCCACAAGCATATGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACCGAATAATATGGGATCTTCATATATTACTGTTGTTCAACCTGCTTTGTGCGAAAAAATTAGTGGCAACCATGAAGCTTTTCTCTTCATTAGTCTATACTTGTTGGCCTTTGGTAGTGCAGGCTTGAAAGCTTCTCTGCCAGCACATGGTGCTGACCAGTTTGATGAAAAAGATCCCAAAGAAACGAGACAAATGTCTATCTTCTTTAATGCTTCTTACTTGCTATTTGCATTGGTGGTTCTGTCAGCTTAA 696 0.398 MVIGQSFIDTRNESHETDASVVADSFISESPILTEIIDVYSTNAPYKRKVSPTNVEEFNHPSTSRKKKKTSTNDANGPKTCNCKKSKCLKLYCDCFGVGIFCGDGCACGGFGNRVEFQEKVVETKQQIESPNPQAYAPKIVPCAADVPPNNMGSSYITVVQPALCEKISGNHEAFLFISLYLLAFGSAGLKASLPAHGADQFDEKDPKETRQMSIFFNASYLLFALVVLSA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04248 231 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 18 148 IPR044522 GO:0003700
Mepo1g04248 231 Gene3D MFS general substrate transporter like domains 144 231 IPR036259 -
Mepo1g04248 231 SMART CXC_2 76 117 IPR033467 -
Mepo1g04248 231 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 79 110 IPR005172 -
Mepo1g04248 231 Pfam POT family 162 221 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mepo1g04248 231 ProSiteProfiles CRC domain profile. 77 231 IPR005172 -
Mepo1g04248 231 MobiDBLite consensus disorder prediction 52 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04248 Mepo-Chr1 49831978 49833418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04248 55 141 CPP Transcription Factor Family AT4G14770 43.678 1.49e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mepo1g04248 PTR2 2.4e-12 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04248 K21776 - gmx:547664 121.709