Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04243 ATGTCTATTTATCATGTTTTGGTCCTAAACTTTTTTCAGGAGAAGGGAATTGATAAGAGTAAAAGAAAATGGAAGTTATGGAGAAATTCATCAGAAGTTATTGGATTTGGAACTTCTATGAAGAAGGGGCACAGTTTTGGTGCTTATGATAAATATTCTTATTCTTCGTTTGTGGTGAATGAAGAAGCTTTTGCTGCTGCAATGGCTGCTGTGGTAAGAACTCCACACAAAGATTTCTTGCTGATCAAGCAGGAATGGTCTGCCATCCGCATCCAGTCTGCTTTTCGAGGCTTCTTGGCAAGAAGAGCTTTAAGGGCTTTGAGGGCATTGGTGAGGCTGCAAGCTATATTTCGCGGCCGGTTAGTGAGAAAACAAGCAGCTGTCACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGAACGCGTCAAGGCAAAGAATGTCAGGAATTCTCCAGAAAAAAAATCTAAGCAGGGAATATTATACGAGCAACATAATCAAGTTAATCCTATTAAACAAGCTGAGCAAGGGTGGTGTGACATACCAGGAACTGTGGAAGAAGTTAAAGCAAAACTAAAAATGAGGCAAGAAGGAGCAATTAAGAGAGATAGAACAATGTCATACTCCAACTCCACCCTGCGATCAACAGCGAGTTCTAGTCCAAGCTCAAGAGGTTCTAAGCCATTGACTCCTCTCAACCACCGCAGCTTAGACGGTAAGAGCATGTTAGAACGCTGGATTGCAGCTAAGCCATGGGAGAGCAGGTTAATGGGAGACATCTATTTGGACTCACCCGGCATGACTCCATTGTCCAGGAAGAGTGAGAATGTTGAACTCTCCTTCAACTCATATCAACAACATGGCTTAGTAAAAGCAAGAAAAAATGGGGTAACAACTAGGGTTTCATCCAAATCTCTTACAACAAGCCAATCAACTCCGTCGTCTTCGGCTATAAGCTCCGAATGCATGTATGATGATAGCCCTTTATCAATTTCATCCACATCTGAATCACCAGCCAGGGTGGAAGATGCAAAGGAAAGGGAAATCGGGAAACCGACCTACACTAATTTGACAGCGTCAACCAAAGCTAAGCTGAAAGCGTGTAGACATTCGTCTCCCAATTTGAAGAGACTCTTTATGGATGATGATTGTCTGTCTCGTAGCGCGCGAACAAACGTTCTAAGCACAGATACTAGAAGCATTTCTGGTTCCTATTCTTCGGCTAATATATGGAAGGATCTTTATGCAACTCCTTTAAGGACAAGTTATCAAAATCGATTTACAATGGGACATAAGTAG 1299 0.4242 MSIYHVLVLNFFQEKGIDKSKRKWKLWRNSSEVIGFGTSMKKGHSFGAYDKYSYSSFVVNEEAFAAAMAAVVRTPHKDFLLIKQEWSAIRIQSAFRGFLARRALRALRALVRLQAIFRGRLVRKQAAVTLRCMQALVRVQERVKAKNVRNSPEKKSKQGILYEQHNQVNPIKQAEQGWCDIPGTVEEVKAKLKMRQEGAIKRDRTMSYSNSTLRSTASSSPSSRGSKPLTPLNHRSLDGKSMLERWIAAKPWESRLMGDIYLDSPGMTPLSRKSENVELSFNSYQQHGLVKARKNGVTTRVSSKSLTTSQSTPSSSAISSECMYDDSPLSISSTSESPARVEDAKEREIGKPTYTNLTASTKAKLKACRHSSPNLKRLFMDDDCLSRSARTNVLSTDTRSISGSYSSANIWKDLYATPLRTSYQNRFTMGHK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04243 432 PANTHER IQ-DOMAIN 5-RELATED 19 392 - -
Mepo1g04243 432 MobiDBLite consensus disorder prediction 203 230 - -
Mepo1g04243 432 MobiDBLite consensus disorder prediction 301 321 - -
Mepo1g04243 432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 126 IPR027417 -
Mepo1g04243 432 Pfam IQ calmodulin-binding motif 108 125 IPR000048 GO:0005515
Mepo1g04243 432 Pfam IQ calmodulin-binding motif 86 105 IPR000048 GO:0005515
Mepo1g04243 432 ProSiteProfiles IQ motif profile. 84 112 IPR000048 GO:0005515
Mepo1g04243 432 Gene3D - 82 135 - -
Mepo1g04243 432 SMART iq_5 106 127 IPR000048 GO:0005515
Mepo1g04243 432 SMART iq_5 83 105 IPR000048 GO:0005515
Mepo1g04243 432 MobiDBLite consensus disorder prediction 199 236 - -
Mepo1g04243 432 ProSiteProfiles IQ motif profile. 108 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04243 Mepo-Chr1 49708484 49711258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04243 13 415 IQD Protein Family AT1G72670 42.683 2.78e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04243 - - gmx:100784093 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04085 6 53068180 53070477 Mepo1g04243 1 49708484 49711258 PCT