Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04237 ATGTCCACCTCTTCGAAAAAGTACGATGTGTTCATCAGTTTCAGGGGCCAAGACACGCGTGAAACATTCACAAGCCATCTTCATTATGCTTTATGCAAGGAAAATATCATAACATACATTGATGATAATCTTGTAAAGGGTGATGAAATTGGTGAAGCACTTGCTGAAGCAATCCAAGACTCACGCATATCTCTCGTTGTTTTCTCCAAAAATTATGCAACCTCAAAGTGGTGCTTGAATGAACTCCTCAAAATACTTGAATGCAAAAAACTTCATGGTCAAGTTGTTATACCTGTGTTCTATAACACAGAAGCCATCAACAATGAATCCTTTGAAAACACTGTTTCTGAATGGAGAGCTGCTCTCACGGAGGCCGCCAATATACCTGGATGGGATAGTCAAAGTCGAACCTATAAGGATGATTCTCAAGTCATTCAGAGCATTGTCAGTGATGTTTGGAAAAAGCTAGCCTTGATGTATCCTAATGAACTGAAAGGCCTTGTTCATAACGATCAACACGGTAGTTATACTGAGTCAATGCTGAGAAGATATGCAAGAATCAGAATTTGGGGCATGGGTAGAATAGGGAAGACAACCATAGCCAGACAGATGTTTGCAAAGCATTTTGCACAATATGACAGCGCTTGCTTTATGGAAAATGTAAGTGAAGAAATAGAAAAGTTTGGACGAAGGTACATCCGTAATAAGCTTTTTAGTGAGCTGCTTAAGCGACAAATTACTGCATCGGATATTCTTGGAGCCACATTCATTGAGAGGATCTTTAGTGGTAGAAAAGTTTTCTTTGTACTTGATGATGTGGGTAATGCTGCACAATTAGAATATTTGTGTGCAGAACTTGATGACCTTGGACCAAACAGTAGGCTAATTATCACGGCAAGAGATAGGCAAACACTCAAGGGAAAAGTTGATGTGATACATGAAGTTAGAAATTGGAATTTTGAAGAATCTCTGAGGCTTTTTAGCTTAGGAGCTTTCAAGCAAAACCATCCTAAAGAGGGTTACAAACTTCTCTCACAAAGAGCAGTTGCATATGCAGGAGGCGTTCCATTAGCTTTAAAAGTTTTAGGTTCACATTTTTATTCTAGAAGTCCTGAATTCTGGGAACCTGAATTGAAAAATTTGGAGAACAAGGGGGAATCCTTACATGGAATTCAAGAAGTGTTAAAAGTAAGCTATAATGGATTAACAGTCCGAGAAAAGGAAATGTTTTTAGATATTGCGTTCTTTTTCAAAGATGAAAAAAGAGATTTCGTGACAAGAATACTAGATGCCTGTGGTTTCAATGCTGCCAGTGGAATAGTCACCCTTGAAGATAAAGCTCTTATCACTATTTTGTATGATAATAAAATACAAATGCATGACTTACTACAACAAATGGCTTTTGACATAGTTCGGCAAAAGAAAGACCGCACTAGCAGAGACCCGGAAAAATGCAGCAGGTTAAGAGATATTAAAGAAGTTTGTGATGTATTAAAAAATAGCAAGGGCACTCATAAAGTTGAAGGGATAATATTTGATTTGTCTCAAAAGGAAGATTTGCATGTCGGGGCAGACACATTCAAAATGATGACTAAATTAAGATTTCTAAGATTTTATAACAGTGTCCATGTTTGGTTACCGGGATGCACAGTTCCGAGTCAGTTCAAATTCCGAACAATAGGTTCCTCTTCCTCCATTACTATTGAACTTCCTCGACTTTCCAAAAATGTTGGATTCATTTATTCGGTTGTTGTCTCTCCATCCTTTGGAATGGAGGAGCAAGATAATAATATTGAAATCAGATCTGTATACTATTCGGAAAGTGGCAACAGTGGGGATCTTAGTGGTTCTTATATTCTGAAAGAGTGTGGAGTCTATCCAATTTATTGCTCAGAATTTCCAAGGCTTGCAGCTACCATTAATTTGGACAAGGACTTAGAAAGGGAAATTGCATTGAAGTTGTCACGGATGTTAGGATCAGATTTGAATGAACCGACGCAATTTGAGTCCGATTCAATTGAAAGATATGATGATGACGACGATGAGAGGGAATTAGGCAATGAGATTGATGAGTCAGTTGAAAGATGTGATGAGAAGGAAAGCACTTACATACAGAAGAACCAACAAGATTCGGACTCGAATGAAAGATGTAGCTGTTCATCAAACGAGTGCTTAATGGGGTTCCCAACCTTTGAAATTGGGACTGAAACGACCAACAATTAG 2223 0.3819 MSTSSKKYDVFISFRGQDTRETFTSHLHYALCKENIITYIDDNLVKGDEIGEALAEAIQDSRISLVVFSKNYATSKWCLNELLKILECKKLHGQVVIPVFYNTEAINNESFENTVSEWRAALTEAANIPGWDSQSRTYKDDSQVIQSIVSDVWKKLALMYPNELKGLVHNDQHGSYTESMLRRYARIRIWGMGRIGKTTIARQMFAKHFAQYDSACFMENVSEEIEKFGRRYIRNKLFSELLKRQITASDILGATFIERIFSGRKVFFVLDDVGNAAQLEYLCAELDDLGPNSRLIITARDRQTLKGKVDVIHEVRNWNFEESLRLFSLGAFKQNHPKEGYKLLSQRAVAYAGGVPLALKVLGSHFYSRSPEFWEPELKNLENKGESLHGIQEVLKVSYNGLTVREKEMFLDIAFFFKDEKRDFVTRILDACGFNAASGIVTLEDKALITILYDNKIQMHDLLQQMAFDIVRQKKDRTSRDPEKCSRLRDIKEVCDVLKNSKGTHKVEGIIFDLSQKEDLHVGADTFKMMTKLRFLRFYNSVHVWLPGCTVPSQFKFRTIGSSSSITIELPRLSKNVGFIYSVVVSPSFGMEEQDNNIEIRSVYYSESGNSGDLSGSYILKECGVYPIYCSEFPRLAATINLDKDLEREIALKLSRMLGSDLNEPTQFESDSIERYDDDDDERELGNEIDESVERCDEKESTYIQKNQQDSDSNERCSCSSNECLMGFPTFEIGTETTNN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04237 740 Gene3D - 2 158 IPR035897 -
Mepo1g04237 740 MobiDBLite consensus disorder prediction 673 687 - -
Mepo1g04237 740 SUPERFAMILY "Winged helix" DNA-binding domain 391 497 IPR036390 -
Mepo1g04237 740 Pfam TIR domain 7 163 IPR000157 GO:0007165
Mepo1g04237 740 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 556 IPR044974 GO:0006952
Mepo1g04237 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 413 IPR027417 -
Mepo1g04237 740 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 131 IPR035897 -
Mepo1g04237 740 Gene3D - 319 403 IPR042197 -
Mepo1g04237 740 MobiDBLite consensus disorder prediction 688 705 - -
Mepo1g04237 740 MobiDBLite consensus disorder prediction 663 716 - -
Mepo1g04237 740 Gene3D - 159 312 IPR027417 -
Mepo1g04237 740 ProSiteProfiles TIR domain profile. 6 156 IPR000157 GO:0007165
Mepo1g04237 740 PRINTS Disease resistance protein signature 186 201 - -
Mepo1g04237 740 PRINTS Disease resistance protein signature 352 366 - -
Mepo1g04237 740 PRINTS Disease resistance protein signature 260 274 - -
Mepo1g04237 740 Pfam NB-ARC domain 187 399 IPR002182 GO:0043531
Mepo1g04237 740 SMART till_3 7 128 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04237 Mepo-Chr1 49667613 49672849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04237 3 557 WRKY Transcription Factor Family AT4G12020 30.662 1.63e-57 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04237 - - mtr:11419903 1008.82