Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04236 ATGAGCAAATTAAGGGAAATAGGTTCTAATAATCAAGGCATAATGTTTTATTCTAGCAAGAAGTACGATGTGTTTGTCAGCTTTAGAGGCGAAGACACTAGGTATGGTATCACCAACCATATTTACGAAGCTCTGATTCATAAATCAATAAAAACATACATAGATTATGAGCTCGATAGAGGAGAAGATGTTTGGCCAGCACTTTCAAAAGCTATTGAAGACTCACACATCTCCGTCGTTGTTTTCTCTGAAAATTTTGCAACTTCAAAATGGTGTTTGGAAGAACTAGTGAAAGTGCTTGAATGCAGAAAAGATCATGGTCAAATTGTTATACCTGTTTTCTATAAAACAAATCCGTCTCACATAAGAAATCAGACTCACAGTTATGAGAAAGCATTTGCAAAACATGAGAGAGATCTTGGGACCAAAAATAATGCATCCAACAAACGTATGGTGCTTAAGTGGAGATCTGCCCTTACTGAAGCAGCTAATATATCTGGATGGGATACTCAAACTCACAGGGATGAATCTAACCTCATCCAGAAAATTGTGAATGATGTATTGCAAAAGCTACAACTGAGATACCCTAATGAACTGGAAGGCGTTGTGAGAAATGAAAAAAACTGTGAATGTGTAGAATCATTATTGGAAAGTGTTCAAATACTTGGAATTTGGGGTATGGGTGGAATGGGAAAGACAACCATTGCCAAAGTCTTGTTTGCCAAACACTTTGCCCAATATGACCATGTTTGCTTTGCTAATGCTAAAGAATATTCTGTTAGCAAGCTGTTCTCAGAGCTACTAAAGGAAGAATTTTCCCCATCTGATGTTGTAATATCTACATTTCATATGAGAAGGCTGAAAAGTACCAAAGTTTTGATTGTACTTGATAATGTGGACAGTTTAGAGCAGTTTGAATATTTATGTAAAGATTATGGTGCGCTACATAAAGATAGTAGACTCATTATAACAACAAGAGACAAACAATTGCTGAGTGAACGAGTTCATCGGATATATGAGGTCAAGCAATGGGAAGATCCAAAATCTCTAGAGCTTTTTTGCCTAGAAGCTTTCGTGCCAAGTCATCCCCGAGAGAAGTATGAGCATCTCTTGCAAAAGGCAATCACTTATGCAGGGGGCGTTCCACTGGCCCTTAAAGTTTTTGCTTTACTTCTTCGTTCAAGAGAGATTGAATTTTGGGAGAGTGCTTTTAAGAAACTCGGTAAGCATTCTAATGCTGCAGTGAATAAAGTTTTAAAATTGAGCTATGATGACTTAGATGCACTACAGAAGAAGGTATTTCTAGACATAGCATTCTTTTTCATAGGAGAAAAGAAAGATTGTGTTGCGAGGATACTAGATGCTTGTGATTACGAAGCAAGTAGCGAAATAGAAGTCCTCAAAGACAAGGCTTTGATAACTATCTCAAATGACCATACAATACAAATGCACGACTTGCTACAAAAAATGGGTTCGGACATATGCAATGATTGTGGCACAGACCCTGCAACACATACTCGACTGAGTGGAAAAGCAGCCTTTGAAGTAATTGAAGAAAACAAGGGGAGTAGCTTCAATGAAGGCATAATGTTGGATTTGTCTCAAAATAATAATTTACCTTTAAGTGCAGACACATTCACCAAGATGAAAGGCTTAAGAATTCTTAAACTCTATGCACCCTCTAACCAGAAATGTACTAATACATACCTACCCCTTCCCAAATTTCTTGAGCAATTTTCAAATAAACTGAGGTATTTTGAGTGGAACGGATACCCTTTTGAGTCTCTTCCAAAACCTTTCAAGGCTAAGTTAATTGTTGAGATCCGCATGCGGTACAGCATTGTTAAAGAACTCTGGCAGGGGATACAGGAATTTGATAAACTAGAGGGAATTGACCTGAGTGAATGCAAGCATTTTGTACAGCTTCCAGATTTGTCCAAGGCGTCAAGACTTAAATGGATCAATCTCTCTGGTTGTGAGAGTCTGGTTGATCTTCATCCATCTGTTTTACGCACAGACACACTTGTTACTTTGATACTGGATAGGTGTACAAAGGTTAGGAGGGTTAGAGGTGAAAAACGTTTAAGTTTTTTGGAGGAGATCAGTGTGGATGGGTGCAAAAGTCTGGAGGAATTTGCAGTGTCCTCGGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATCCAAACACTGGACCTATCAATTGGGGATCTTCCCAAACTTAAACGACTTAATCTAGAGAGTTTAAGACTCAACCATCTTCCAAAGAAGTTACCTAGTGTAACATCTCTAAGGGAGTTGAAGATTTCTGGCAGTAGACTAATAGTTGAGAAACAACAGCTACATGAGCTGTTTCATGGCTTACGTTACCTACGAATACTACATATGAAGGATTTTATAAACCAGTTTGAACTCCCCAACAACATCGACGTTGTATCAAAGTTAATGGAATTAAACCTTGATGGAAGCAACATGAAGAAGTTGCCTGAAAGCATTAAAAAACTTGAAGAATTGGAAATTCTCTCTTTGGTGAATTGCAGGGAGCTTGAGTGCATACCAGAGCTTCCACCTCTCATCACAGTGTTAAATGCAGTTAACTGCACGTCACTCGTTTCAGTGTCAAGTCTAAAAAATTTAGCAACAAAGATGATGGGAAAAACCAAACACATTTCATTCAGTAACAGCTTGAACTTGGATGGACATTCACTCGGACTTATAATGGAAAGTCTCAATTTAACAATGATGAGTGCTGTGTTTCAAAATGTGTCTGTAAGAAGACTTCGTGTGGCCGTTCACAGCTACAACTATACCAGTGTTGATGCTTGTGAACCAGGAACATGTATCCCAACTCTGTTGCAATGTCAAATAGCTACTGACTCCTCCATTACCTTTAATTTGCTTCCTGATCGTTCCAACCTGCTAGGGTTTATATACACAGTGGTTCTTTCTCCATCTGGTGGAGATGGAATGAAGAAGGGTGAAGCTAGAATAAAGTGTCAATGCAACTTGGGAGAACAAGGTATAAAGGTTAGCTGGCTAAATGCTGATATCATGGAACTGAACTCAGATCATGTTTATGTGTGGTACGATCCATTTCATTGTGACAGCATTCTCAAATTTGATAAACCTGAGATTTATTTTGAGTTTTGTGTTACAAACGATATGGGGGAAGTTGATGGTTCAATTGGTATTAAAGAGTGCGGGGTACGACTTGTAAGTGATGAAGAATTGGAGAGTGTTTTATCCGAATTGGAATTGGATTCACCAAAGAAAGAAGAGTTGAAGAAGGCAGTGGAATTGGAATCAGGACGTAGTATTGCACAAGTCCCCTCCCATTCTGAATCAAGTGACACATCTGGTGAAGAGTCAAGCATTGGGCGAGGTACCCAGGTACAAAACCAAGAGTTGGCCTTGAATAAAAATTGTGACTGCTTAATAGGTCCAATATCATTGGGAACGGGAAAGGTTTTAACATTACTTATGGTAATTGGATTCCTAGCTTCAAGGGCCTTCAAATCCTAA 3525 0.3858 MSKLREIGSNNQGIMFYSSKKYDVFVSFRGEDTRYGITNHIYEALIHKSIKTYIDYELDRGEDVWPALSKAIEDSHISVVVFSENFATSKWCLEELVKVLECRKDHGQIVIPVFYKTNPSHIRNQTHSYEKAFAKHERDLGTKNNASNKRMVLKWRSALTEAANISGWDTQTHRDESNLIQKIVNDVLQKLQLRYPNELEGVVRNEKNCECVESLLESVQILGIWGMGGMGKTTIAKVLFAKHFAQYDHVCFANAKEYSVSKLFSELLKEEFSPSDVVISTFHMRRLKSTKVLIVLDNVDSLEQFEYLCKDYGALHKDSRLIITTRDKQLLSERVHRIYEVKQWEDPKSLELFCLEAFVPSHPREKYEHLLQKAITYAGGVPLALKVFALLLRSREIEFWESAFKKLGKHSNAAVNKVLKLSYDDLDALQKKVFLDIAFFFIGEKKDCVARILDACDYEASSEIEVLKDKALITISNDHTIQMHDLLQKMGSDICNDCGTDPATHTRLSGKAAFEVIEENKGSSFNEGIMLDLSQNNNLPLSADTFTKMKGLRILKLYAPSNQKCTNTYLPLPKFLEQFSNKLRYFEWNGYPFESLPKPFKAKLIVEIRMRYSIVKELWQGIQEFDKLEGIDLSECKHFVQLPDLSKASRLKWINLSGCESLVDLHPSVLRTDTLVTLILDRCTKVRRVRGEKRLSFLEEISVDGCKSLEEFAVSSDLIENLDLSSTGIQTLDLSIGDLPKLKRLNLESLRLNHLPKKLPSVTSLRELKISGSRLIVEKQQLHELFHGLRYLRILHMKDFINQFELPNNIDVVSKLMELNLDGSNMKKLPESIKKLEELEILSLVNCRELECIPELPPLITVLNAVNCTSLVSVSSLKNLATKMMGKTKHISFSNSLNLDGHSLGLIMESLNLTMMSAVFQNVSVRRLRVAVHSYNYTSVDACEPGTCIPTLLQCQIATDSSITFNLLPDRSNLLGFIYTVVLSPSGGDGMKKGEARIKCQCNLGEQGIKVSWLNADIMELNSDHVYVWYDPFHCDSILKFDKPEIYFEFCVTNDMGEVDGSIGIKECGVRLVSDEELESVLSELELDSPKKEELKKAVELESGRSIAQVPSHSESSDTSGEESSIGRGTQVQNQELALNKNCDCLIGPISLGTGKVLTLLMVIGFLASRAFKS 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04236 1174 Gene3D - 345 427 IPR042197 -
Mepo1g04236 1174 MobiDBLite consensus disorder prediction 1102 1130 - -
Mepo1g04236 1174 Pfam NB-ARC domain 214 427 IPR002182 GO:0043531
Mepo1g04236 1174 Gene3D - 189 341 IPR027417 -
Mepo1g04236 1174 Gene3D Ribonuclease Inhibitor 477 716 IPR032675 -
Mepo1g04236 1174 Gene3D Ribonuclease Inhibitor 717 903 IPR032675 -
Mepo1g04236 1174 SMART till_3 21 165 IPR000157 GO:0007165
Mepo1g04236 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 437 IPR027417 -
Mepo1g04236 1174 SUPERFAMILY L domain-like 530 895 - -
Mepo1g04236 1174 PRINTS Disease resistance protein signature 834 850 - -
Mepo1g04236 1174 PRINTS Disease resistance protein signature 378 392 - -
Mepo1g04236 1174 PRINTS Disease resistance protein signature 286 300 - -
Mepo1g04236 1174 PRINTS Disease resistance protein signature 221 236 - -
Mepo1g04236 1174 ProSiteProfiles TIR domain profile. 20 191 IPR000157 GO:0007165
Mepo1g04236 1174 SUPERFAMILY "Winged helix" DNA-binding domain 415 495 IPR036390 -
Mepo1g04236 1174 MobiDBLite consensus disorder prediction 1107 1130 - -
Mepo1g04236 1174 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 168 IPR035897 -
Mepo1g04236 1174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 873 IPR044974 GO:0006952
Mepo1g04236 1174 Gene3D - 18 188 IPR035897 -
Mepo1g04236 1174 Pfam TIR domain 21 197 IPR000157 GO:0007165
Mepo1g04236 1174 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04236 Mepo-Chr1 49646612 49665584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04236 16 878 WRKY Transcription Factor Family AT4G12020 28.523 6.01e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04236 - - mtr:11418910 2008.8