Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04228 ATGGAACCTCGAATTGGGAATAAGTTCCGTCTTGGGAGAAAAATTGGTAGCGGATCTTTTGGAGAGATCTATTTAGGTACCAATATTCAGACTAATGAAGAAGTTGCGATTAAGCTTGAAAATGTTAAAACCAAGCACCCTCAATTGTTGTATGAAGCAAAGCTGTATAAAATACTTCAAGGAGGAAATGTTTTTTTGTTGGGTTTCTTTTCTTTGGAAGCTGGGATACCGAATGTGAAATGGTCTGGTGTCGAAGGAGAGTACAATATCCTTGTGATGGATTTACTTGGTCCTAGTCTTGAGGATTTATTCAATTTCTGTAATAGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAAATGATAAATCGAGTTGAATTTGTTCATACCAAGTCATTTTTACATCGGGACATCAAGCCAGACAATTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTACATCATTGACTTTGGTCTTGCGAAGAAATTCAGAGACAGTGCACATCAGCATATTCCCTACAGAGAGAATAAGAATCTGACGGGAACTGCTAGATATGCCAGTATGAATACTCATCTTGGAATTGAGCAAAGTCGTAGGGATGATTTAGAGTCGCTTGGATATGTTCTTATGTATTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCAGGTACTAAAAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTCTCCACATCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTATTGTCGGTCACTGAGGTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGACTTTTGCGTGACCTATTCATCCGTGAAGGATTCCAGTTTGATTATGTCTTCGATTGGACTATCTTGAAATATCAGCAGTCTCAAATCGCCACCCCTCCTTCCCGTGGTATTGGTCTTGCTGCTGGACCGAGTTCTGGTCTGCCGCTAGCTTCTGCAAATGCTGATGGACAGTCAGGTGGTGGAAAAGATGGTAGGAATATTGGGTGGTCTTCGTCTGATCCCTCTCGAAGGAGAACCTCTGGACCTATTGCTAATGATGGAATCTTATCTAGAGAAAAAGCCCCACTTACAAATGATTTAACCGGATCTAAAGATGCTATGTTATCGAGTTCAAGTTTCTTTCGGTCAAGTGGATCTGCAAGGCGAGGTGCTATGTTAAGCAGCCGTGATGCAGCTGTTGGCAGTGAGACAGAGCCTTCCTCTCGTCCTCTCACGCTGGATTCAATTCAAGGAGCAGTCCGTAAAAGCTCTGGTGTTCAGAGAAGTTCACATATCATGGCATCGGAGCACAACCGAGTATCATCTGGAAGAAACACATCAAACATAAATAATTTGGATTCAACGCTTAAAGGTATTGAGAGTCTGCATTTAAACGATGAGAGGGCACAGTATTAG 1458 0.415 MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYEAKLYKILQGGNVFLLGFFSLEAGIPNVKWSGVEGEYNILVMDLLGPSLEDLFNFCNRKLSLKTVLMLADQMINRVEFVHTKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKFRDSAHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQIATPPSRGIGLAAGPSSGLPLASANADGQSGGGKDGRNIGWSSSDPSRRRTSGPIANDGILSREKAPLTNDLTGSKDAMLSSSSFFRSSGSARRGAMLSSRDAAVGSETEPSSRPLTLDSIQGAVRKSSGVQRSSHIMASEHNRVSSGRNTSNINNLDSTLKGIESLHLNDERAQY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04228 485 PANTHER CASEIN KINASE-RELATED 13 416 - -
Mepo1g04228 485 CDD STKc_CK1_delta_epsilon 8 292 - -
Mepo1g04228 485 MobiDBLite consensus disorder prediction 400 425 - -
Mepo1g04228 485 MobiDBLite consensus disorder prediction 329 383 - -
Mepo1g04228 485 ProSiteProfiles Protein kinase domain profile. 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04228 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Mepo1g04228 485 Gene3D Transferase(Phosphotransferase) domain 1 1 316 - -
Mepo1g04228 485 SUPERFAMILY Protein kinase-like (PK-like) 5 300 IPR011009 -
Mepo1g04228 485 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mepo1g04228 485 FunFam Putative Casein kinase I 1 96 - -
Mepo1g04228 485 MobiDBLite consensus disorder prediction 345 360 - -
Mepo1g04228 485 FunFam Casein kinase I isoform delta-like 1 318 - -
Mepo1g04228 485 Pfam Protein kinase domain 10 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04228 485 SMART serkin_6 9 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04228 Mepo-Chr1 49567418 49572844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04228 7 229 EF-hand Containing Proteins AT4G36070 24.783 1.60e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo1g04228 Pkinase 8.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04228 K02218 - gmx:100787808 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04079 6 53000243 53005762 Mepo1g04228 1 49567418 49572844 PCT