Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04183 ATGTTGACTTGCATAGCTTGTTCAAAGCAACTCAATAATGGATCTCTTCATCAACAAGAAGAGGATGAAGCTGTGCAAACACCTAGCACTAAACAAGCCATCAAAGCTCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATATAAGAATTGCAAGCCTTGTTCAGGATCTTCAAATGGTAACAAGAACAAAAAATATGCTGATTCTGACATGGGATCAGATTCAGCAAGGTTCAACTGGGCGTACCGAAGAACCGGGAGCGCAAGTTCAACACCAAGGATGTGGGGGAAGGAAATGGAAGCGAGACTCAAAGGGATTTCCAGTGGAGAAGGAACACCAACATCGGTGAGTGGACGTACCGAGTCAGTTGTGTTCATGGAAGAAGAGGATGAATCTAAGGAATGGGTTGCACAAGTTGAACCTGGTGTGCTCATTACTTTTGTTTCATTGCCTGAAGGTGGAAATGATTTGAAGAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGCAGAGAACTATGACAAGGTTATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGTTCAAAGATTGAATCTGCGAGGGACAGCCCCGTCACACCTCCTCTAACCAAAGAGCGCCTGCCCCGTCATTTGCACCACCCAATGACAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCATATGCAACCTCAGCCTTGCTATGAAACAAGTGGTCTGCCATCAAAATCTAATCTTTCCAACATTGGTGTGCCAAAGACCGAAAGATCATCCATTGATGCTTCTGTAAGGACGAGTTCATCGGAAGAGGAAGATCACTCAGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGACGAACCAGGAGTATACATCACTATCAGAGCACTACCAGGTGGAACCAGAGAACTTAGGCGTGTCCGTTTCAGCCGAGAGAAGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCCAGGATACAAGAGCAATATTTGTGA 1110 0.4577 MLTCIACSKQLNNGSLHQQEEDEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNWAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDESKEWVAQVEPGVLITFVSLPEGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLTKERLPRHLHHPMTMGYSSSDSLDHHHMQPQPCYETSGLPSKSNLSNIGVPKTERSSIDASVRTSSSEEEDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04183 369 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Mepo1g04183 369 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
Mepo1g04183 369 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Mepo1g04183 369 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Mepo1g04183 369 MobiDBLite consensus disorder prediction 262 291 - -
Mepo1g04183 369 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Mepo1g04183 369 MobiDBLite consensus disorder prediction 200 304 - -
Mepo1g04183 369 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04183 Mepo-Chr1 48711364 48716067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04183 1 369 Major Intrinsic Protein MIP AT1G31880 47.287 4.87e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04183 - - gmx:100805480 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04183 1 48711364 48716067 Mepo1g04183 1 48711364 48716067 ECH