Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04177 ATGAACCACAGTACCACCTTAAGGAGTTTATGTTGCTTCGTTTGTATTGGGTTTGCGTTTGTTTCCACATCAATAGAAGCTGAAGCAACAAAAACAGACATTAAAGATTCCAACAAATTTCATTCTCATATCAATTATGATGTTTTTCTCAACTTCCGAGGTTCAGACATCCGCCATGGTTTTCTGAGCCACTTAACTCAAGCTCTCCGTCTAAAGAAAATTGTAGTATTTGTGGATGATCAGATTCACAAAGGAGATGAAATACAACAATCACTTTTTCAAGCAATTGAAGAATCTTTGATCTCTTTGGTGATCTTTTCACAGAATTACACTTATTCACATTGGTGTTTGGATGAACTAGTCAAAATTGTTCAATGCAGACACAAAGATAGACAGATTCTAATTCCAGTTTTCCACAAATTAGATCCTGCAACTGTGAAGCATCAAAGAGGAACATATGCAAATGCATTTGCGGAACATGAAAAAAAGTACAATTTGACGAGGGTTCAAAAGTGGAGATCTGCTTTGAGTGAATCTGCTAGTATCTCTGGTTTTCCTTCATCGATGTTTCCGCACGAAGCTGATCTTATTGAACACATAGTTAAACGTGTGTGGATGAAGTTGAATGATATTCATCATAAGCATAAACTTCACTCAAAAAGAGTGCTTATTGGACTTGGCAATCAAATTTCACACGTTGAATCATTGTTATTGGTAGATTCAAAAGATGTCCGCGCCATTGCTATTTGGGGTATGCCTGGTATAGGGAAAACAACTATTGCAGAAAACGTATATAACAGGCTACGTTCTAAATATGACAATTGTTACTTTAAGGCTAATGTGAGAGAAGAATGTAGAAGACATGGAATTCTGTATTTAAAGAAAGAGCTTTATTCTACTCTATTCAGGCAACAAGATTTGAAATTTGACACACCACATGGATTGCCCTATTTTGTTGAGAGGAGGCTTCGTAGTATGAAGGTTCTTGTTGTTCTTGATGATGTCAATGATCCACAGCAACTAGAAAATTTAATTGGAACAAATCTTGCTAGGTTTGGAAGAGGTAGTAGAATCATCATAACTACAAGAGATAAGCAAGTACTCGCCAAAAGGGTTGATGACAATGATGTGTATGAAGTTAAGCCATTGGAGTTTGATGACTCTTTTCGACTTTTCAATGTGAATGCCTTTGAACAAAACCATCCAAAAATGGACTTCTATGAGTATGAGTTAACAAAGAAAATGGTCAATTATGCCCAAGGTATCCCATTAGTTCTTAAAGAACTAGGTCATTTTATTGGTGGAATAAAAGATAAAAGGACATGGGAAAGCCAATTTGAGAAGCTTACAACAAGAGCGACATTACTGAAAAATGTCCATGATGTTATTAGATTGAGTTGTGATGATCTCAATCGTGTTGAGAAGAAGGTGTTGTTGGATATTGCATCTCTTTCGGATGGATTGCATTTGAAAGTTGGCAACATACAACTGCCAATGAATGTAGACAACATACAACTTTTGTTGGAGGATGGTGGTTATAATTTGGTCGATGTTTTACAGAGTCTGAAAAATAAAGCTCTTCTAACTATTTCTCAACATAAGGACGTATCTATGCATAGCATCATACAATTAACGGCTCTTGAAATTGTTCGTGAAGAATCCATTGAAGTACCGAAACATAACAAGGGAAGCCAGGCTACTTATGGTAAGGGTATGAAACAACTATCCCGATCAATTGGACTCCAAACCAAACTTGAAAAGTTACTTCTTGCACACAGTGAGATTGAGAATTTGCCCGAAGACATAAAGCTTCTTACAAATCTGAGACATCTGAATTTAAGCCATTGTAAGAAGCTTCAAAGTCTCCCAGTTCTTCCCTCGTTATTGAAAACCCTAGATGCAAATGACTGTGTATCACTGAAGACTGTAACTTTCCTTTCAGCCACTCTTCAACTACAGAAGGAAAACAAGACAAGGGTTTCCTTCTGGAATTGTCTGGAACTAGATGAACCTTCTCTCAATGCTATTGGGTTGAATGCACATATCAACATGATGAATTTTGCGTTCCAGCATGTATCCACATTTGGAAATCATTATGAATCACAAGCTACATATGTGTACCCAGGAAACAGTGTTCCATATTGGTTGGAGTATAAGACAACAAATGATTACATGACTATTGATCTGAGCTCACATTATTCTTTTGATCATTTGGGCTTCATTTTCTGCTTCATTGTTCCTGAAGTTGAATCACAGGGTTCCAGTTTGATATTTAATATTGCTACTGGTGAAGGCGAAGATGATTACATCCAAGTGTTCTTAGAAAGAACCAGTCATGGAATCCAATCAGACCATGTTTATCTAATCTACAATCAAGTTTTATCCCGCTATATAAATAGCCGACTCAAAATTCAGCCTAAGTTGGAAATTAGGGTTACACTGGAATCAGGAACACTGATATCAGAGCGTTTGCCATTAATGCTGCTCAAAGGGTTTGGGATCATTCCAATAAACACTTCACAATATATCCATTTCAGTGAACAAATGGAATTGGCTGATTGTCAAAGTCTTATGCAATCATCAGTTGTGAAGTGTTTATTGTTTTCAGTGTTTTCTGGATTTTTAGTCCTATTCCACCATAGTATTTGGTTTTCTTGA 2658 0.3657 MNHSTTLRSLCCFVCIGFAFVSTSIEAEATKTDIKDSNKFHSHINYDVFLNFRGSDIRHGFLSHLTQALRLKKIVVFVDDQIHKGDEIQQSLFQAIEESLISLVIFSQNYTYSHWCLDELVKIVQCRHKDRQILIPVFHKLDPATVKHQRGTYANAFAEHEKKYNLTRVQKWRSALSESASISGFPSSMFPHEADLIEHIVKRVWMKLNDIHHKHKLHSKRVLIGLGNQISHVESLLLVDSKDVRAIAIWGMPGIGKTTIAENVYNRLRSKYDNCYFKANVREECRRHGILYLKKELYSTLFRQQDLKFDTPHGLPYFVERRLRSMKVLVVLDDVNDPQQLENLIGTNLARFGRGSRIIITTRDKQVLAKRVDDNDVYEVKPLEFDDSFRLFNVNAFEQNHPKMDFYEYELTKKMVNYAQGIPLVLKELGHFIGGIKDKRTWESQFEKLTTRATLLKNVHDVIRLSCDDLNRVEKKVLLDIASLSDGLHLKVGNIQLPMNVDNIQLLLEDGGYNLVDVLQSLKNKALLTISQHKDVSMHSIIQLTALEIVREESIEVPKHNKGSQATYGKGMKQLSRSIGLQTKLEKLLLAHSEIENLPEDIKLLTNLRHLNLSHCKKLQSLPVLPSLLKTLDANDCVSLKTVTFLSATLQLQKENKTRVSFWNCLELDEPSLNAIGLNAHINMMNFAFQHVSTFGNHYESQATYVYPGNSVPYWLEYKTTNDYMTIDLSSHYSFDHLGFIFCFIVPEVESQGSSLIFNIATGEGEDDYIQVFLERTSHGIQSDHVYLIYNQVLSRYINSRLKIQPKLEIRVTLESGTLISERLPLMLLKGFGIIPINTSQYIHFSEQMELADCQSLMQSSVVKCLLFSVFSGFLVLFHHSIWFS 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04177 885 Gene3D - 213 377 IPR027417 -
Mepo1g04177 885 Pfam NB-ARC domain 238 455 IPR002182 GO:0043531
Mepo1g04177 885 ProSiteProfiles TIR domain profile. 44 208 IPR000157 GO:0007165
Mepo1g04177 885 SUPERFAMILY L domain-like 578 648 - -
Mepo1g04177 885 ProSiteProfiles Leucine-rich repeat profile. 607 629 IPR001611 GO:0005515
Mepo1g04177 885 Gene3D - 383 467 IPR042197 -
Mepo1g04177 885 FunFam Disease resistance protein (TIR-NBS-LRR class) 42 210 - -
Mepo1g04177 885 Pfam TIR domain 45 219 IPR000157 GO:0007165
Mepo1g04177 885 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 185 IPR035897 -
Mepo1g04177 885 Gene3D Ribonuclease Inhibitor 468 669 IPR032675 -
Mepo1g04177 885 PRINTS Disease resistance protein signature 246 261 - -
Mepo1g04177 885 PRINTS Disease resistance protein signature 322 336 - -
Mepo1g04177 885 PRINTS Disease resistance protein signature 603 619 - -
Mepo1g04177 885 PRINTS Disease resistance protein signature 419 433 - -
Mepo1g04177 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 481 IPR027417 -
Mepo1g04177 885 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 46 673 IPR044974 GO:0006952
Mepo1g04177 885 Gene3D - 43 212 IPR035897 -
Mepo1g04177 885 SMART till_3 45 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04177 Mepo-Chr1 48599126 48605903 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04177 39 558 WRKY Transcription Factor Family AT4G12020 29.356 7.35e-51 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04177 - - tpra:123883108 628.246