Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04176 ATGTTTGAAAATTTTCTGCAACTTTGTTGGCAGGGGAGTGAGGCTATTGTAAGCCTAGCTACCGACTTGTCGATAATCAAGGAGTTGCAGTTGAATCCAAAGGTGTTTGCTAAAATGAGTAATCTAAAATACCTGGATATTTATAGTAAGGGGTACTCTTGTGATTTTGTCCAGAGTCGAGAAGGCTTTTATCTTCCTCAAGGGCTTGAATCTTTGCCAAATGAACTCAGATACCTTCGTTGGGCACATTTCCCTTTGGAGTCCTTGCCATCTAATTTTTCCGGGGAAAATCTTGTAGTAATTGACTTGCAGTACAGCCGGGTGAGAGAACTTTGGCATGAAGATAAGGATAGCTCAATATAA 363 0.405 MFENFLQLCWQGSEAIVSLATDLSIIKELQLNPKVFAKMSNLKYLDIYSKGYSCDFVQSREGFYLPQGLESLPNELRYLRWAHFPLESLPSNFSGENLVVIDLQYSRVRELWHEDKDSSI 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04176 120 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 111 IPR044974 GO:0006952
Mepo1g04176 120 SUPERFAMILY L domain-like 21 113 - -
Mepo1g04176 120 Gene3D Ribonuclease Inhibitor 6 117 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04176 Mepo-Chr1 48559766 48567616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04176 12 116 WRKY Transcription Factor Family AT4G12020 40.952 4.74e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04176 - - mtr:11419915 149.058