Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04170 ATGGAAACAGTTGTTGGAATTGAGGATTATGATTCTGGGAAGCTTAGAGACAGTGGGATTGATAGAAGCAGTCATGCTTTGTCTTCACCGAAGCGGATTTCCAATCCAGTTGTGTACAAACTTGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTCGAGGATTTTCTTGAATATGAAAACAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTATGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCGGAAGGCACTGCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGTATATTGAACAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGGTCACCTGTTCATTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTCAGAAATGAGAAGGTTCTGTCTGAAACTCCATTCCAGGAAGCACATTCCATAGCATCAAGTTTAAATTATAGTCTTAGTAATCAATCTGGGAGTATCGATCAGTGTTCTAGACCTTCCGGAGGAGTGATAGAAAGTGGTTCATCTGCTTCTGCTGTCAATTCCGCTTTGAAGCATGATTTTTCCATGACAGACGGAGAAATATGTTTGGATAAGTTGTCGATCAAAGAACTTCATGAACTGTTTAAGGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAGGAGGAGGATTGCTATGAGTTTAACTAACTCATGCGATGTTTCAGCGACAACATTCACTGTTAAAGATAATAAAATAACTAGAAAATGTGAAGAAGAATGTTCTAGAAATGTGAATGCTGCAGATGTAATCTCTGCGGAAAATATGGCTGTACAAAGGGATATCAAGTATAATGATTCAAATGCCGTGGGTGGTTGCGAAGTTGATAATAATCAAGTTGCTTCTGAAACAAGACTGGAAAATCTTAATATGGAACATGAATTAGAAGATGAGGATCAGCTGAGAGAACAAAGAGCTGCGAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGCAAATTCCTAGGTCATCGAGTTCTAATAAAAGTATGGGACACATACAGGCTTCTCCAACATCTTATGCTGGGCCTGCTAGGAATGCTTATCCAGAGACAAGAACGTTTACCACCAGGTTTGACTCTCTTGGAGGTTCTGGTTTCCAAATTCCTTGTGTTACTCGGGTGCGAAGAAGTCGTCCACGGAAAAATATCACATCTCTTATGAAATTCCATCCAACTGGCACGGGCGATGCTGCAAAGTTAGGCAATAAAGTCGTTAGCAATCATGGTTCTGATCCTGATAGTGAAATCGAGAACAAATTCTTAAAGCCAAGTTCAATGCTTGTGAAGGTTCATCAGACGTCTACTTCTGAGTCTACGAAAGAGAAGAAGCAGTATCCGGTAATGATTGGCACAACTGATCCAAGGCAGGAATTGAGGCCTAAAAAGATAGATCCCTCAAGTCATGCCACAGAGGGCAATATAGTTAATATTCCCACTGCTAAGGGTGGAATGAGGAGGAAGCATCATCGAGCATGGACCCTTGTTGAGGTATTGAAACTGGTTGATGGTGTATCGCGGTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCTCTCCTTTTCTTCATACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACCGACACCTGCAGATGAGGGGATAAATTCGAGGAAGCATGGTACTGCCCCAATTCCCGAGCCGATTTTAGTACGGGTGAGAGAGCTTGCAGAGATAAATTCTCAAGTACCTTCAAACTCCAGTTCAAGCAAGTTGACAGCTAATGGTGCAACTAATGGTGCAAGGAGTATGCATGGAGACAGAGCAGGGTACTTGTAG 1998 0.4249 METVVGIEDYDSGKLRDSGIDRSSHALSSPKRISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSMECISIERSSSGKLRLECSEGTAEADLGKLNAKFQYIEQMLQKVKQEEKLRLSSRSPVHSHVQIDSQCSADKFPVRNEKVLSETPFQEAHSIASSLNYSLSNQSGSIDQCSRPSGGVIESGSSASAVNSALKHDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLRRRIAMSLTNSCDVSATTFTVKDNKITRKCEEECSRNVNAADVISAENMAVQRDIKYNDSNAVGGCEVDNNQVASETRLENLNMEHELEDEDQLREQRAAKRMRKPTKRYIEELSENESREQIPRSSSSNKSMGHIQASPTSYAGPARNAYPETRTFTTRFDSLGGSGFQIPCVTRVRRSRPRKNITSLMKFHPTGTGDAAKLGNKVVSNHGSDPDSEIENKFLKPSSMLVKVHQTSTSESTKEKKQYPVMIGTTDPRQELRPKKIDPSSHATEGNIVNIPTAKGGMRRKHHRAWTLVEVLKLVDGVSRCGPGRWSEIKRLSFSSYSHRTSVDLKDKWRNLLKASFAPTPADEGINSRKHGTAPIPEPILVRVRELAEINSQVPSNSSSSKLTANGATNGARSMHGDRAGYL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04170 665 MobiDBLite consensus disorder prediction 353 373 - -
Mepo1g04170 665 SUPERFAMILY Homeodomain-like 542 601 IPR009057 -
Mepo1g04170 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 540 599 IPR017930 -
Mepo1g04170 665 MobiDBLite consensus disorder prediction 374 397 - -
Mepo1g04170 665 MobiDBLite consensus disorder prediction 353 402 - -
Mepo1g04170 665 MobiDBLite consensus disorder prediction 633 665 - -
Mepo1g04170 665 MobiDBLite consensus disorder prediction 633 653 - -
Mepo1g04170 665 SMART sant 544 597 IPR001005 -
Mepo1g04170 665 Pfam Myb-like DNA-binding domain 547 595 IPR001005 -
Mepo1g04170 665 Gene3D - 535 644 - -
Mepo1g04170 665 CDD SANT_TRF 546 596 - -
Mepo1g04170 665 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 643 - -
Mepo1g04170 665 ProSiteProfiles Myb-like domain profile. 548 595 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04170 Mepo-Chr1 48492127 48500653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04170 548 594 Single Myb Histone (SMH) Gene Family AT1G72740 46.939 9.07e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo1g04170 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04170 - - tpra:123883109 1018.84