Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04165 ATGCACATTAATCTTGTACCCAAATGCAATGAGCCAGAATGCACATTGATGCGTTTATTTTTTGTTTGTCTCTTGTTGATGCCGGAATTGATCGGTGAAGATCCATTGATATTTCAATCTTATAATAATGGTTCTCAAACTCATAAGTATGATGTCTTTGTTAACTTTCGGGGTTCAGACATCCGGGATGGTTTTCTTGGTCATTTGATTAAAGCGCTATCTCGAAAGAAGATTAATGCCTTCGTAGATGATAAGCTTAAGAAAGGAGATGAAATAGCACCATCACTTCTTGAAGCAATTGAAACATCCTTGATTTCTTTGGTCATATTCTCTCAAAATTATGCTTCTTCACAATGGTGTTTGGATGAGCTAGTCAAAATTGTTAAGTGTAGAGAGAAAGATGGACAGATTTTACTGCCTGTTTTCTACAAAGTTGATCCTACAATTGTGAGGCATCAAAAAGGAACTTATGCAAATGAATTTGTTGAACATGACAGAAAGTACAATTCCAGTAGGGTGAAACAGTGGAGATCTGCTTTGAAGAAATCCGCGGATATCTCAGGGTTTCAGTCATCAAATTTGCCGGATGATGCTCATCTTGTTGAAGAAATAGTTGAAAGTGTGTTGAAGAGGTTGGATCATGTGCGTATAGTTAATTCAAAAAGACTTGTTGGAATTGAAAAACAAATTTCACATGTTGAATCATTGTTACAAGTAGAGGTACAAGATGTTCGTGCTATTGGAATTTGGGGTATGAGTGGTATTGGTAAAACAACTATTGCGGAAGTGCTATATAGCAGGCTATGTTCTGAATATGAAGGTTGTTACTTTAAGGTTGATGTAAAAAAAGAATGGGGAGGATATAGAAATATGCATTTAAAGAAAGAGCTTTTTTCTACTCTATTAGGGGAACAAGATTTGAAAATTGACACACTACACGGATTACCCAGTTCCGTTGAGAGGATGCTTCATCGTACGAAGGTTCTTGTAGTTCTTGATGATGTAAGTGATCAAGAGCAACTGGATATTTTAATTGGAACACTTGAATGGTTTGGAAGAGGAAGTAGAATCATCATAACAACTAGAGATAAACAAGTACTTGCCGGAATGGTTGTTGATAATGATATATATGAGGTCAAGGAGTTAGACTTTGATGAGTCTCTTAGGCTTTTCAATTTGTATGCCTTTGAACAAAATGATACTAATAAAAATCAAATAGAGTACTCTGAATTGTCAAAGAAGATGGTCAAGTACGCCGAAGGAATTCCAGGTGTTCTTGTAGATTTGGGTCGTGAGCTTCTTGGAAAAGATAAAAGATATTGGAAAATCCAATTAGGGAGGCTTAAAAAAAAAGTTCCAATTAAAAAAGTTCATGAAAATGTTAGACTGAGTTACAATGATCTTGATCATCTTGAGAAGAGGATATTTTTAGACATTGCATGTTTTTTAGATGGGCTGCATCTCAAACTTGACCATATAAAATTGTTGGCAAAAGATCGCGGTTATTCAGTGGGTGTTGAGTTAGAAAGTCTGAAAAATAAAGCTCTTATAATTATTTCTCCAGATAATGTTGTATCCATACACAACATTATACAAGAATCAGCTTGGAAAATTGTTCGCGATGAATCAGATAACGATCCGGAAAATCAAAGTCGACTACTAGATTTTGATGACATTTATGAAGTACTAAAATATGACAAGGGGAGTAAGGCTATTAGAAGCATAGCTACCGACTTGTCAAAAATTAAGAAGTTGCAATTAAATTCCCTAGTGTTTTCTAAGATGGACAAACTACAGTATCTGGATATCTATGGCAAAGGAGATAATGCGTTCCTCAGAATTTCTCGGAGCTTGTATCTTCCTCAAGGGCTTGAATCTTTGCCAAATGAACTCAGATATCTTCGTTGGGCACATTACCCTTTGGAGTCCTTACCACCTAAGTTTAACGGGGAAAAACTTGTTGTGTTGAACTTGCAGTATAGCCAAGTCAAAAAACTTTGGAATAAAAAGAAGGAACTAGTGAATTTAAAGTTTCTTATATTGAGATTTTCCTCACATCTGGTGGAGCTTCCAGACTTGTCCAAGTCTAGAAATCTTGCAATAATTGATCTTCGCCTCTGTGTACGGTTGACTAGTATACATCCATCTGTGTTTTCTCTGAAAAAGCTTGAGAAATTGGATCTAGGTGGATGTTTTTCACTCACAAGCCTCAAAAGCAACATTCATTTAAGCTCGCTTCGTTATTTATCCCTTGCTGGTTGCATTTCTCTAAAGGAGTTTGCAGTAACCTCAAAGGAAATGGTAATGTTGAATTTAGAACACACAGACCACCAAATATCTACATCTAGTGATGGTCATGATTATGATGCTCAAGGAACATACGTGTATCCAGGAAGCTATGTTCCAGAATGGTTCATGTATAGCACAACATGCGATTACATGACTATTGATCTCTCTTTTGTGGATGATTCATCTTCATTGGCCTTCATTTTTTGCTTCATTGTTCCACAAGTCGAATCACAGGGTTTCAGTTTGAAATTTAATATTAGTGTTGGTGGTGAAGGTGACAATATTCAATTGAAATTGGATAGACCTAGTCTTGAAATTAAATCAGATCATGTGTATCTAATATGTGACAAAGGTTTGTCTCGCTATCTAAATAGTCGAGTGAAAGATCAGCCGAAGTTCAAAATCAAAGTCACAGCAGAATCAAGAACACCAACGTCAGAGTATGTGCAAGTGTTGTTGAGAGGGGTTGGGGTTAGTCCAATAAACATCTCACAATAA 2787 0.3617 MHINLVPKCNEPECTLMRLFFVCLLLMPELIGEDPLIFQSYNNGSQTHKYDVFVNFRGSDIRDGFLGHLIKALSRKKINAFVDDKLKKGDEIAPSLLEAIETSLISLVIFSQNYASSQWCLDELVKIVKCREKDGQILLPVFYKVDPTIVRHQKGTYANEFVEHDRKYNSSRVKQWRSALKKSADISGFQSSNLPDDAHLVEEIVESVLKRLDHVRIVNSKRLVGIEKQISHVESLLQVEVQDVRAIGIWGMSGIGKTTIAEVLYSRLCSEYEGCYFKVDVKKEWGGYRNMHLKKELFSTLLGEQDLKIDTLHGLPSSVERMLHRTKVLVVLDDVSDQEQLDILIGTLEWFGRGSRIIITTRDKQVLAGMVVDNDIYEVKELDFDESLRLFNLYAFEQNDTNKNQIEYSELSKKMVKYAEGIPGVLVDLGRELLGKDKRYWKIQLGRLKKKVPIKKVHENVRLSYNDLDHLEKRIFLDIACFLDGLHLKLDHIKLLAKDRGYSVGVELESLKNKALIIISPDNVVSIHNIIQESAWKIVRDESDNDPENQSRLLDFDDIYEVLKYDKGSKAIRSIATDLSKIKKLQLNSLVFSKMDKLQYLDIYGKGDNAFLRISRSLYLPQGLESLPNELRYLRWAHYPLESLPPKFNGEKLVVLNLQYSQVKKLWNKKKELVNLKFLILRFSSHLVELPDLSKSRNLAIIDLRLCVRLTSIHPSVFSLKKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCISLKEFAVTSKEMVMLNLEHTDHQISTSSDGHDYDAQGTYVYPGSYVPEWFMYSTTCDYMTIDLSFVDDSSSLAFIFCFIVPQVESQGFSLKFNISVGGEGDNIQLKLDRPSLEIKSDHVYLICDKGLSRYLNSRVKDQPKFKIKVTAESRTPTSEYVQVLLRGVGVSPINISQ 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04165 928 Pfam NB-ARC domain 233 436 IPR002182 GO:0043531
Mepo1g04165 928 Pfam TIR domain 49 215 IPR000157 GO:0007165
Mepo1g04165 928 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 766 IPR044974 GO:0006952
Mepo1g04165 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 479 IPR027417 -
Mepo1g04165 928 SUPERFAMILY L domain-like 577 775 - -
Mepo1g04165 928 Gene3D - 46 215 IPR035897 -
Mepo1g04165 928 Gene3D - 216 379 IPR027417 -
Mepo1g04165 928 Gene3D - 381 469 IPR042197 -
Mepo1g04165 928 PRINTS Disease resistance protein signature 718 734 - -
Mepo1g04165 928 PRINTS Disease resistance protein signature 419 433 - -
Mepo1g04165 928 PRINTS Disease resistance protein signature 246 261 - -
Mepo1g04165 928 PRINTS Disease resistance protein signature 322 336 - -
Mepo1g04165 928 SUPERFAMILY "Winged helix" DNA-binding domain 456 564 IPR036390 -
Mepo1g04165 928 ProSiteProfiles TIR domain profile. 48 212 IPR000157 GO:0007165
Mepo1g04165 928 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 189 IPR035897 -
Mepo1g04165 928 SMART till_3 49 186 IPR000157 GO:0007165
Mepo1g04165 928 FunFam Disease resistance protein (TIR-NBS-LRR class) 46 214 - -
Mepo1g04165 928 Gene3D Ribonuclease Inhibitor 528 786 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04165 Mepo-Chr1 48437858 48446183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04165 41 769 WRKY Transcription Factor Family AT4G12020 33.869 2.79e-96 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04165 - - mtr:11419915 1060.83