Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04161 ATGCACAATAATAATCTTGTATTTTTTGTTTATCTCTTGTTTATCTGTTTGACATCTGAATTTCAATGTTCTGTTCCTCAAAGTGACAAGCATGATGTCTTTGTTAGCTTTAGAGGTTTAGACATCCGTGAAGGTTTTCTTAGTCATTTGGTTGAAGCTTTATCTCGAAAGAAAATTCTTTTCTTTGTAGACAATAAGCTTAGAAAAGGTGATGAAATAGCACAATCACTTCTTGAAGCAATTGAAACATCCTTGATTTCTTTGGTTATATTCTCTCAAAACTATGCTTCTTCATCTTGGTGTTTGGATGAACTTGTCAAAATTGTTGAGTGTAGAGAGAACAATGGACAGATTTTATTGCCTGTTTTCTACAAAGTTGATCCTACAATTGTGAGGCATCAGAAGGGAACTTATGCAAATGAATTTGTTGAACATGACAAAAAGTATAATTCAAGTAGGGTGAAACAGTGGAGATCTGCTTTGAAGAAATCTGCAGATATATCAGGGTTTCATTCATCACAATTTTTGTATGAGGCTGAACTTATTGATGAAATAGTTAAAAGTGTGTTGAAGAAGTTGGATCACGTGCGTATAGTTAATTCAAAAGGACTTGATGGAATTGAAAAACAAATTTCACATGTAGAATCCTTGTTACAAGTAGAGTCACAAGATATTCGTGCTATTGGAATTTGGGGGATGAGTGGTATAGGAAAGACAATTATTGCAGAAGAAGTATATAAGAGGCTATGTTCTAAATTTGAAGGTTGTTACTTTAAGGCTAATATAAGAGAAGAATGGGGAGGACATGTAAATATGTATTTAAAGAAAGATCTTTTTTCTACTCTATTAGGGGAACAAGATTTGAAATTTGACACACAGCATGGATTGCCCTATTTTGTCGAGAGGAGGATTCGTCGTATGAAGGTTCTTATTGTTCTTGACGATGTCAATGATTCACGACAACTAGAAACTTTAATTGGAACACTTGATTGGTTTGGAACAGGTAGTAGAATCATAGTAACAACTAAAGATAAACAAGTAGTTGCCAAAATGGTTGTTGACAATGATAGATATGAAGTTAAAGCATTGGACTTTGATGACTCTTTTCGACCAATAAGCATCTCACAATGTCTCAAGATCACTCAACACATCGAAATGACTCATGAAGGTTCAAATTTCTCAGATTCTATATCACTCGACACATTGAAATGGCTCATGAATATATTGATTGATGTAATTTATAAACTTGCATTAACAATTTTCATAGGTTTAGTGACATATAATGTGTTTTACTTCTGCGTTGACTTTTTCGCAGTTTTAGTCAACTTAACTGTGTTTTGCTTGTGCATTTACGTGCCCATACAAGTTCTATTGACGATCTTAAAGATGATTTATTCTTAA 1401 0.3333 MHNNNLVFFVYLLFICLTSEFQCSVPQSDKHDVFVSFRGLDIREGFLSHLVEALSRKKILFFVDNKLRKGDEIAQSLLEAIETSLISLVIFSQNYASSSWCLDELVKIVECRENNGQILLPVFYKVDPTIVRHQKGTYANEFVEHDKKYNSSRVKQWRSALKKSADISGFHSSQFLYEAELIDEIVKSVLKKLDHVRIVNSKGLDGIEKQISHVESLLQVESQDIRAIGIWGMSGIGKTIIAEEVYKRLCSKFEGCYFKANIREEWGGHVNMYLKKDLFSTLLGEQDLKFDTQHGLPYFVERRIRRMKVLIVLDDVNDSRQLETLIGTLDWFGTGSRIIVTTKDKQVVAKMVVDNDRYEVKALDFDDSFRPISISQCLKITQHIEMTHEGSNFSDSISLDTLKWLMNILIDVIYKLALTIFIGLVTYNVFYFCVDFFAVLVNLTVFCLCIYVPIQVLLTILKMIYS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04161 466 PRINTS Disease resistance protein signature 227 242 - -
Mepo1g04161 466 PRINTS Disease resistance protein signature 303 317 - -
Mepo1g04161 466 Gene3D - 205 357 IPR027417 -
Mepo1g04161 466 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 195 - -
Mepo1g04161 466 Pfam TIR domain 30 196 IPR000157 GO:0007165
Mepo1g04161 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 373 IPR027417 -
Mepo1g04161 466 SMART till_3 30 167 IPR000157 GO:0007165
Mepo1g04161 466 Gene3D - 28 198 IPR035897 -
Mepo1g04161 466 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 361 IPR044974 GO:0006952
Mepo1g04161 466 ProSiteProfiles TIR domain profile. 29 193 IPR000157 GO:0007165
Mepo1g04161 466 Pfam NB-ARC domain 212 370 IPR002182 GO:0043531
Mepo1g04161 466 SUPERFAMILY Toll/Interleukin receptor TIR domain 26 170 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04161 Mepo-Chr1 48354967 48358684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04161 28 369 WRKY Transcription Factor Family AT4G12020 31.412 1.96e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04161 - - mtr:11424339 717.998