Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g04154 | ATGGTTAGAAGTCCTAAGGAGGTTAATAAAGGTGCTTGGTCTCGTGAAGAAGATGATATCCTCTCCAAATATGTTGTCATTCATGGAGAAGGAAAATGGCAGAAGGTTGCTCAAAATGCAGGTTTGAAGCGGTGTGGAAAAAGTTGCAGACAAAGATGGTTGAATTATCTCAAACCAGGTATAAAGAGAGGCGACATCTCTACCGATGAAGAGGATATGATCATAAGACTTCATCGTCTTCTTGGTAACAGATGGTCATTGATAGCTAAGAGGCTGCCAGGACGAACAGATAATGAAATCAAGAACTACTGGAACACTAATCTGTCAAAGAAGTTACAGAAACAGCCCACGTTGCCATCATCGTCTTCTGTTTCACTTCAACATAATCATCACAAATGCGGACATGTAGCACCAGAAGCTCCAAAGCCTAGGAGACTGAAGGTTGTTCATCAATACAACAAAATTTTGGAGAAGAATAATGGAAATGAGTGTGATCAAGGCAGCGATGAAACTTCTATTGCTGATTTTCTAATTGACTTTGATCATCAAGATCAATTGATGGTTGGTGATGATGAGTCTAATTCAAAGATTCCACAAATGGAAGATCACAAGCAGAGAAATTTGATCCTTCAGAGGCCCTTCTGGATGTGGAGCTTAAGAAGATGGCTTCCTTTCTTGGACTTGAAAATGATTGAAGTGATTTATTGCAATGAGGGGACCAAGAGAAGAAAAAGTTCAATGAGTTGTGAATCATATAGTCTTTGCTATATGCCATTTTATATGTATTTCCTAACTAAACATCTAACTAGATGA | 813 | 0.3862 | MVRSPKEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGDISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTLPSSSSVSLQHNHHKCGHVAPEAPKPRRLKVVHQYNKILEKNNGNECDQGSDETSIADFLIDFDHQDQLMVGDDESNSKIPQMEDHKQRNLILQRPFWMWSLRRWLPFLDLKMIEVIYCNEGTKRRKSSMSCESYSLCYMPFYMYFLTKHLTR | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g04154 | 270 | ProSiteProfiles | Myb-like domain profile. | 58 | 108 | IPR001005 | - | |
Mepo1g04154 | 270 | ProSiteProfiles | Myb-like domain profile. | 5 | 57 | IPR001005 | - | |
Mepo1g04154 | 270 | Pfam | Myb-like DNA-binding domain | 10 | 57 | IPR001005 | - | |
Mepo1g04154 | 270 | Pfam | Myb-like DNA-binding domain | 64 | 108 | IPR001005 | - | |
Mepo1g04154 | 270 | CDD | SANT | 12 | 57 | IPR001005 | - | |
Mepo1g04154 | 270 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 6 | 61 | IPR017930 | - | |
Mepo1g04154 | 270 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 112 | IPR017930 | - | |
Mepo1g04154 | 270 | FunFam | MYB-related transcription factor | 9 | 62 | - | - | |
Mepo1g04154 | 270 | FunFam | Transcription factor TT2 | 66 | 135 | - | - | |
Mepo1g04154 | 270 | SMART | sant | 9 | 59 | IPR001005 | - | |
Mepo1g04154 | 270 | SMART | sant | 62 | 110 | IPR001005 | - | |
Mepo1g04154 | 270 | SUPERFAMILY | Homeodomain-like | 8 | 104 | IPR009057 | - | |
Mepo1g04154 | 270 | CDD | SANT | 67 | 108 | IPR001005 | - | |
Mepo1g04154 | 270 | Gene3D | - | 3 | 63 | - | - | |
Mepo1g04154 | 270 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 179 | - | - | |
Mepo1g04154 | 270 | Gene3D | - | 67 | 134 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g04154 | Mepo-Chr1 | 48273116 | 48274915 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g04154 | 1 | 112 | MYB Transcription Factor Family | AT5G40330 | 64.912 | 5.41e-50 | 162 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Mepo1g04154 | Myb_DNA-binding | 5.8e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g04154 | K09422 | - | gmx:547568 | 283.878 |