Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g04152 | ATGAGTAACTGGTTAGGATTTTCTCTTACTCCACACTTGAGGATTGATGAAGAATTTGGTACAGAAAACCAAAACCAAAACCAAAACCATGTAGCTGAAGGATCAGAAATAGGAAGAAACTATGTTCCTACTTCTTCTCATCCTCACCCTCATCATTTATCTATTATGCCTCTACGTTCTGATGGTTCACTTTGTGTTTCTGATTCCTTTACTCCTCAAGAATGGAGATATGAGAATGCAATAACTGATGGAAATTCAAATGAAGAAGGACCAAAACTTGAAGATTTTTTGGGATGTTACTCAAACCAAAACCAGAATAGTACTACTACTAGTACTATGTCTAAAATCAATGTTAATGTGTCACCAAGTTTTTGTGCAAATAATAATCCAGAGATTGAAGCAGGAGAGAATCTAACAAACCAATCTTTGATTCACTCTTTTCATGCATATAATGATAACAACAACAACAATCATCATGCTTTAATCCATGATAATACCATGTATAAATCTTGGATGACTCAAACTCAGTTTTCTTCTGAGGGGAAAACAACTTCTTCTAGTGATGGAAATGGTTTTCAATCTCTTAATTTGACTATGAGTCCTAGTGTGCAAAATGGTGTTGGTGGGGGTGTTGGTAGTGCAATTTCTAATGTTCAAGTGAATGAAGATCCTAGGAAAAGATCTTTGTCAAAATCTAATGCTCGAGAACCTGTTCCTCGTAAATCTATTGATACTTTTGGACAAAGAACTTCTCAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAAGCACATTTGTGGGATAATAGTTGCAGAAAAGAAGGGCAAACAAGGAAAGGAAGGCAAGTTTACCTTGGTGGGTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCACTGAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGATAAGGAACTTGAAGAAATGAAGCACATGACTAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCATCTGTGTATAGAGGTGTGACAAGACACCATCAACATGGAAGGTGGCAGGCTCGAATTGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGCACACAAGAGGAGGCTGCAGAAGCATATGATATTGCAGCAATCAAGTTTAGGGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTCAAGAGAATATGCTCAAGCTCAACTTTAATTACCGGAGATCTCGCAAAACGTTCTCCTAAAGACTCTACCCCTCCTGCAACCACAGCCGAGGACTTCAATTCATGCGGAAGTTCATCAACACTTTCTCAGCCGCCTCCTCTGACTATTACCGATGGTGAACAACATTCTGATGAATTGTCCAACATGGTGTGGAATTCCAACAACGACGAGCAAAAACCTCAGAACAGCACCAACATCACCGAATCATCACAGCACGGATCACCAAGCAACAAGAATGAGTTGAACCCTCAAAGTCCCAAATGTTCATTGGGACTACCTAATGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGTTACTTCACACTGCATGGACCAAAATTTGATGATGGAAGCAATGAAAATGACCACATGAACAACAACAGGCTTGGAAATTTGGGTTTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA | 1737 | 0.3944 | MSNWLGFSLTPHLRIDEEFGTENQNQNQNHVAEGSEIGRNYVPTSSHPHPHHLSIMPLRSDGSLCVSDSFTPQEWRYENAITDGNSNEEGPKLEDFLGCYSNQNQNSTTTSTMSKINVNVSPSFCANNNPEIEAGENLTNQSLIHSFHAYNDNNNNNHHALIHDNTMYKSWMTQTQFSSEGKTTSSSDGNGFQSLNLTMSPSVQNGVGGGVGSAISNVQVNEDPRKRSLSKSNAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYDKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLITGDLAKRSPKDSTPPATTAEDFNSCGSSSTLSQPPPLTITDGEQHSDELSNMVWNSNNDEQKPQNSTNITESSQHGSPSNKNELNPQSPKCSLGLPNEFGVSGADYGHGYFTLHGPKFDDGSNENDHMNNNRLGNLGLVNQVPMFALWNE | 578 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g04152 | 578 | ProSiteProfiles | AP2/ERF domain profile. | 354 | 412 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | MobiDBLite | consensus disorder prediction | 179 | 223 | - | - | |
Mepo1g04152 | 578 | CDD | AP2 | 353 | 414 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | SUPERFAMILY | DNA-binding domain | 353 | 414 | IPR016177 | GO:0003677 | |
Mepo1g04152 | 578 | Pfam | AP2 domain | 353 | 404 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | Pfam | AP2 domain | 252 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | ProSiteProfiles | AP2/ERF domain profile. | 252 | 318 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 86 | 495 | - | - | |
Mepo1g04152 | 578 | SMART | rav1_2 | 252 | 324 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | SMART | rav1_2 | 354 | 418 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | SUPERFAMILY | DNA-binding domain | 251 | 320 | IPR016177 | GO:0003677 | |
Mepo1g04152 | 578 | MobiDBLite | consensus disorder prediction | 179 | 239 | - | - | |
Mepo1g04152 | 578 | MobiDBLite | consensus disorder prediction | 224 | 238 | - | - | |
Mepo1g04152 | 578 | MobiDBLite | consensus disorder prediction | 432 | 524 | - | - | |
Mepo1g04152 | 578 | CDD | AP2 | 251 | 320 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 251 | 320 | - | - | |
Mepo1g04152 | 578 | FunFam | AP2-like ethylene-responsive transcription factor | 353 | 414 | - | - | |
Mepo1g04152 | 578 | MobiDBLite | consensus disorder prediction | 439 | 520 | - | - | |
Mepo1g04152 | 578 | Gene3D | AP2/ERF domain | 354 | 414 | IPR036955 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | Gene3D | AP2/ERF domain | 251 | 320 | IPR036955 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | PRINTS | Ethylene responsive element binding protein signature | 253 | 264 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo1g04152 | 578 | PRINTS | Ethylene responsive element binding protein signature | 394 | 414 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g04152 | Mepo-Chr1 | 48255262 | 48258840 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g04152 | 1 | 440 | AP2-EREBP Transcription Factor Family | AT1G72570 | 50.324 | 6.04e-139 | 408 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Mepo1g04152 | AP2 | 7e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g04152 | K09285 | - | gmx:100809762 | 832.017 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo1g04152 | 1 | 48255262 | 48258840 | Mepo1g04152 | 1 | 48255262 | 48258840 | ECH |