Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04152 ATGAGTAACTGGTTAGGATTTTCTCTTACTCCACACTTGAGGATTGATGAAGAATTTGGTACAGAAAACCAAAACCAAAACCAAAACCATGTAGCTGAAGGATCAGAAATAGGAAGAAACTATGTTCCTACTTCTTCTCATCCTCACCCTCATCATTTATCTATTATGCCTCTACGTTCTGATGGTTCACTTTGTGTTTCTGATTCCTTTACTCCTCAAGAATGGAGATATGAGAATGCAATAACTGATGGAAATTCAAATGAAGAAGGACCAAAACTTGAAGATTTTTTGGGATGTTACTCAAACCAAAACCAGAATAGTACTACTACTAGTACTATGTCTAAAATCAATGTTAATGTGTCACCAAGTTTTTGTGCAAATAATAATCCAGAGATTGAAGCAGGAGAGAATCTAACAAACCAATCTTTGATTCACTCTTTTCATGCATATAATGATAACAACAACAACAATCATCATGCTTTAATCCATGATAATACCATGTATAAATCTTGGATGACTCAAACTCAGTTTTCTTCTGAGGGGAAAACAACTTCTTCTAGTGATGGAAATGGTTTTCAATCTCTTAATTTGACTATGAGTCCTAGTGTGCAAAATGGTGTTGGTGGGGGTGTTGGTAGTGCAATTTCTAATGTTCAAGTGAATGAAGATCCTAGGAAAAGATCTTTGTCAAAATCTAATGCTCGAGAACCTGTTCCTCGTAAATCTATTGATACTTTTGGACAAAGAACTTCTCAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAAGCACATTTGTGGGATAATAGTTGCAGAAAAGAAGGGCAAACAAGGAAAGGAAGGCAAGTTTACCTTGGTGGGTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCACTGAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGATAAGGAACTTGAAGAAATGAAGCACATGACTAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCATCTGTGTATAGAGGTGTGACAAGACACCATCAACATGGAAGGTGGCAGGCTCGAATTGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGCACACAAGAGGAGGCTGCAGAAGCATATGATATTGCAGCAATCAAGTTTAGGGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTCAAGAGAATATGCTCAAGCTCAACTTTAATTACCGGAGATCTCGCAAAACGTTCTCCTAAAGACTCTACCCCTCCTGCAACCACAGCCGAGGACTTCAATTCATGCGGAAGTTCATCAACACTTTCTCAGCCGCCTCCTCTGACTATTACCGATGGTGAACAACATTCTGATGAATTGTCCAACATGGTGTGGAATTCCAACAACGACGAGCAAAAACCTCAGAACAGCACCAACATCACCGAATCATCACAGCACGGATCACCAAGCAACAAGAATGAGTTGAACCCTCAAAGTCCCAAATGTTCATTGGGACTACCTAATGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGTTACTTCACACTGCATGGACCAAAATTTGATGATGGAAGCAATGAAAATGACCACATGAACAACAACAGGCTTGGAAATTTGGGTTTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1737 0.3944 MSNWLGFSLTPHLRIDEEFGTENQNQNQNHVAEGSEIGRNYVPTSSHPHPHHLSIMPLRSDGSLCVSDSFTPQEWRYENAITDGNSNEEGPKLEDFLGCYSNQNQNSTTTSTMSKINVNVSPSFCANNNPEIEAGENLTNQSLIHSFHAYNDNNNNNHHALIHDNTMYKSWMTQTQFSSEGKTTSSSDGNGFQSLNLTMSPSVQNGVGGGVGSAISNVQVNEDPRKRSLSKSNAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYDKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLITGDLAKRSPKDSTPPATTAEDFNSCGSSSTLSQPPPLTITDGEQHSDELSNMVWNSNNDEQKPQNSTNITESSQHGSPSNKNELNPQSPKCSLGLPNEFGVSGADYGHGYFTLHGPKFDDGSNENDHMNNNRLGNLGLVNQVPMFALWNE 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04152 578 ProSiteProfiles AP2/ERF domain profile. 354 412 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 MobiDBLite consensus disorder prediction 179 223 - -
Mepo1g04152 578 CDD AP2 353 414 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 SUPERFAMILY DNA-binding domain 353 414 IPR016177 GO:0003677
Mepo1g04152 578 Pfam AP2 domain 353 404 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 Pfam AP2 domain 252 310 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 ProSiteProfiles AP2/ERF domain profile. 252 318 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 86 495 - -
Mepo1g04152 578 SMART rav1_2 252 324 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 SMART rav1_2 354 418 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 SUPERFAMILY DNA-binding domain 251 320 IPR016177 GO:0003677
Mepo1g04152 578 MobiDBLite consensus disorder prediction 179 239 - -
Mepo1g04152 578 MobiDBLite consensus disorder prediction 224 238 - -
Mepo1g04152 578 MobiDBLite consensus disorder prediction 432 524 - -
Mepo1g04152 578 CDD AP2 251 320 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 FunFam AP2-like ethylene-responsive transcription factor ANT 251 320 - -
Mepo1g04152 578 FunFam AP2-like ethylene-responsive transcription factor 353 414 - -
Mepo1g04152 578 MobiDBLite consensus disorder prediction 439 520 - -
Mepo1g04152 578 Gene3D AP2/ERF domain 354 414 IPR036955 GO:0003700|GO:0006355
Mepo1g04152 578 Gene3D AP2/ERF domain 251 320 IPR036955 GO:0003700|GO:0006355
Mepo1g04152 578 PRINTS Ethylene responsive element binding protein signature 253 264 IPR001471 GO:0003700|GO:0006355
Mepo1g04152 578 PRINTS Ethylene responsive element binding protein signature 394 414 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04152 Mepo-Chr1 48255262 48258840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04152 1 440 AP2-EREBP Transcription Factor Family AT1G72570 50.324 6.04e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo1g04152 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04152 K09285 - gmx:100809762 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04152 1 48255262 48258840 Mepo1g04152 1 48255262 48258840 ECH