Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04149 ATGATGAGTGCAAGTTCAAGAAATAGGTCTCTTTTCACACCAAATCAATGGCAAGAACTTGAACAACAAGCCCTAGTTTTTAAATACATGGTTACTGGAACACCTATTCCACCAGATCTCATATACTCTATTAAGAGAAGTTTAGACACTTCAATATCTTCAAGAATCTTTCCACATCCACCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCAAAGTACTGTGAAAGACACATGCACAGAGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTAGTAGTTTCTTCTTCAACAACAACACCAACAAATAACACAAACACAGCATCTTCTTACAACAGAAACATCTCCTTGAACAACAACAACAGCAGCAGCATAAACTCACCTTCTTCTTTCCCTTTTTCTACTTCATCCATGGCTTGTCATGATCAGTCACAATCTTTTTCACAATCCTACCAAAACTCTTCTTTAAACCCTTACTATTACTCTCAATCAGTTACCTCTTCTAAACCCCTTGATCATTCTGATTTTCAAACTCAAGATGCTACTACTCATCACCTCTTTTTGGACTCAACATCTTATTCTCATGATGACAAGGACTTTAGGAGGCAAGTTCAAGGAATAAGGGATGGTGTGGATGAGAGAACTTTCTTTCCAGAAGCTACAGGTTCATCTAGGAGCTGCTATCATGATTCATATCAACAGCAACTATCAGTGAATCCCTTTAAGTCTTACTCAAGCTCACAGTTTCAGAATATCAATGATGATAATTCAAGACAACAACAAGAACAACACTGTTTTGTTTTAGGCACTGACATCAAGTCAACAAGAACAACAAACAAGGACAAAGAAAGTGAGACATCTCAGAAACCACTTCATCATTTCTTTGGTGAGTGGACACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATTCCAACAGATGAGTGA 1044 0.3918 MMSASSRNRSLFTPNQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRIFPHPPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVELVVSSSTTTPTNNTNTASSYNRNISLNNNNSSSINSPSSFPFSTSSMACHDQSQSFSQSYQNSSLNPYYYSQSVTSSKPLDHSDFQTQDATTHHLFLDSTSYSHDDKDFRRQVQGIRDGVDERTFFPEATGSSRSCYHDSYQQQLSVNPFKSYSSSQFQNINDDNSRQQQEQHCFVLGTDIKSTRTTNKDKESETSQKPLHHFFGEWTPKNTDSWLDLASNSRIPTDE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04149 347 MobiDBLite consensus disorder prediction 304 347 - -
Mepo1g04149 347 PANTHER GROWTH-REGULATING FACTOR 5 10 335 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo1g04149 347 Pfam QLQ 12 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo1g04149 347 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo1g04149 347 MobiDBLite consensus disorder prediction 108 156 - -
Mepo1g04149 347 MobiDBLite consensus disorder prediction 304 318 - -
Mepo1g04149 347 MobiDBLite consensus disorder prediction 118 156 - -
Mepo1g04149 347 Pfam WRC 77 119 IPR014977 -
Mepo1g04149 347 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Mepo1g04149 347 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo1g04149 347 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04149 Mepo-Chr1 48214773 48216666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04149 3 325 GRF Transcription Factor Family AT3G13960 40.431 4.35e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo1g04149 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04149 - - gmx:100806024 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04149 1 48214773 48216666 Mepo1g04149 1 48214773 48216666 ECH