Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04135 ATGGACATTCCCTTTGTTACACGTCAATTCAGAAAGGAGATGAAGCTCATTGTCACTGAACTTAATAACCTGCTTAAATACAACTTAACTTTCATCAATAGAGCTCCAGAAAAGTCAACCATCCCCCCTATTCCAGAGGATAGGGAAATCACATCAGCCATTACAAGTGTTGAAGGCATGCTGAGACATCTGGACACGAGCTCAGAGCACGTAACTGAAATTAAATCAATGTGTGATGAATTGGACAAAATGCATGAGCAGCTTCAGAAAGCAGAAGAAATAGCAGGGAGAAACGCTTGTGTAGAGCAACTAAAGGCCATTGCTCAGGAGCTGGAGGATTTTCGAGAATGGTATTTGATTGAACCTGAGCTCAGTCAAATTGAGATCATAAATATCAGAACTGCAATTGATCTTCTTCAGAATTTGATAAAAACTTGCACCATCGAAAGACAGGAGTCAACCAAAGAAGTTGGTTTGAAAATTGAAGAACGAGACTTGGTCTTGAAACTGACTGAAAGCAGTGATAATTCTTCTATACTTTGCATCGTTGGGATGAAAGGTGTGGGGAAGACAACTCTAGCAAAGGCAGTTTATTATTCCAAAGATGTAGTCAAGCATTTCCCTATCCGTGTCTGGGTGACAGAAACTGTAGGAGCAGCCAACAAAGAAAAAGTTCTGCTAATGAAAAAGGACGGGACTAAAGACCAGACATTGACGATGACCGAGCTAGGTGTTCACTTGAAAGATAAGGTCTGCCTTGTTGTTCTAGATAATGTCTCAAACACAACGGATTTTGAAAATCTATATGGAACATTATCTGGATCTGGATGGACAAATGGGAGCAGGATAATGGTGACAACATGCTTTAAAAATGTTGCTTTACATGTCAATAGTAGTAGCACCCCATACCGTGTTCGACTGCTAACGAAGGAAGAGAGTTGGGCATTGTTTCAGAAGGTGGCTGGCATTGAAAAACCCCAAAAAAAGTTAGAACTAAAAATAGAAAAATTTGCAAAGAAGGTAGTGGGAAAATGTGGGGGGGCTTGCCATTAG 1053 0.4046 MDIPFVTRQFRKEMKLIVTELNNLLKYNLTFINRAPEKSTIPPIPEDREITSAITSVEGMLRHLDTSSEHVTEIKSMCDELDKMHEQLQKAEEIAGRNACVEQLKAIAQELEDFREWYLIEPELSQIEIINIRTAIDLLQNLIKTCTIERQESTKEVGLKIEERDLVLKLTESSDNSSILCIVGMKGVGKTTLAKAVYYSKDVVKHFPIRVWVTETVGAANKEKVLLMKKDGTKDQTLTMTELGVHLKDKVCLVVLDNVSNTTDFENLYGTLSGSGWTNGSRIMVTTCFKNVALHVNSSSTPYRVRLLTKEESWALFQKVAGIEKPQKKLELKIEKFAKKVVGKCGGACH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04135 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 347 IPR027417 -
Mepo1g04135 350 Coils Coil 74 94 - -
Mepo1g04135 350 Gene3D - 134 305 IPR027417 -
Mepo1g04135 350 PRINTS Disease resistance protein signature 179 194 - -
Mepo1g04135 350 PRINTS Disease resistance protein signature 246 260 - -
Mepo1g04135 350 PANTHER DISEASE RESISTANCE PROTEIN RP 85 347 IPR044974 GO:0006952
Mepo1g04135 350 Pfam NB-ARC domain 166 347 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04135 Mepo-Chr1 48097500 48098552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04135 182 338 WRKY Transcription Factor Family AT5G45050 26.786 1.30e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04135 - - tpra:123886737 538.495