Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04132 ATGACCATGGAACCAAATCCAACATCAGATCACATTCTTGACTGGCTTGACGGTTCTGTCTCTTTCTTTCCATCATATTTGGATGATCCATATAGCAATGGTTACATCCAAGAATATGAGATATGGAATCAGAATCAAGATATAAGTAACCAGTACCAAATTGATGCCAATACTAATTCTTCTAATGCCACAAACAGTACAACCAACATTGTTGCTGCTAGTACTACCACAAGTGCAACATCCCTTGAGCCTAATAGTTCTAACAACGTACCCTTTTCAGATTTGCCGAAGAAACGAAATGCCGAAGATCAATCAAGTCTCAAAAAACAACCACAAAACCAAAAGAACAAGAGACTTAAGAGTCGTCCGATGAATGAAAGTGATAATGGAGGTGCAGCTCTTGAAGGGACAGTGGTTAGAAAATCTGGTGGGAACAAGAAAGGTGCAGCTAAGGCCAATGGAAATAACAGTAACAATGGAAACAATAAGGATGGTAGGTGGGCTGAGCAGTTGCTCAACCCTTGTGCTGTAGCCATAACCGGTGGAAATCTAAATCGTGTGCAACATCTCTTATATGTTCTCCATGAGCTAGCCTCAACTACCGGTGATGCCAACCACCGGCTTGCAGCGCATGGTCTTCGAGCATTGACACACCATTTATCTTCATCTTCATCATCTACCCCATCAGGGACTATAACTTTTGCATCTACAGAACCACGATTCTTCCAAAAGTCATTACTGAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAGTAACATAGCAAATGCTTCTATTCTTCAAGTTCTAGGTGAAGAGCCGAACAATTTGCGCACCCTTCACATCCTTGACATTGGAGTCTCTCATGGTGTGCAATGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCTCTTGTTCGCCTCACTGTCGTTAATTCCTCTTCATCCACTGAAAATGACCAAAACATGGAGACCCCATTTTCAGTAGGTCCATGTGGTGATACTTTCTCTTCTGGACTCCTTGGTTATGCTCAGACCTTAAATGTCAATCTGCAGATAAAAAAGCTTGATAATCATCCATTGCAGACATTGAATGCTAAAAGTGTTGACACATCCCCTGATGAAACCCTTATTGTCTGTGCTCAGTTCAGGTTGCATCACTTGAATCATAACAGTCCTGATGAAAGAAGTGAGTTTCTGAAGGTGTTGAGAGGCATGGAACCTAAAGGGGTGATATTAAGTGAGAACAACATGGAGTGTTGCTGCAGTAGTTGTGGCGATTTCGCCACTGGATTCTCACGAAGAGTGGAGTACTTATGGAGGTTTTTAGATTCAACCAGTTCGGCATTCAAAAACCGTGACAGTGACGAAAGGAGAATGATGGAAGGTGAGGCTGCAAAAGCATTGACAAACCAGCGTGAAATGAACGAAAGGAGAGAAAAATGGTGTGAAAGAATGAAAAAAACAGGGTTTGCTGGGGAAGTATTTGGAGAGGATGCAATTGATGGAGGTCGAGCTTTGTTAAGGAAGTATGATAATAATTGGGATATGAAAGTAGAAGAAAATAGTACAAGTGTGGAACTATGGTGGAAGAGCCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGGAGAAACAACCAGAGTAG 1665 0.4222 MTMEPNPTSDHILDWLDGSVSFFPSYLDDPYSNGYIQEYEIWNQNQDISNQYQIDANTNSSNATNSTTNIVAASTTTSATSLEPNSSNNVPFSDLPKKRNAEDQSSLKKQPQNQKNKRLKSRPMNESDNGGAALEGTVVRKSGGNKKGAAKANGNNSNNGNNKDGRWAEQLLNPCAVAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTPSGTITFASTEPRFFQKSLLKFYEVSPWFSFPSNIANASILQVLGEEPNNLRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVNSSSSTENDQNMETPFSVGPCGDTFSSGLLGYAQTLNVNLQIKKLDNHPLQTLNAKSVDTSPDETLIVCAQFRLHHLNHNSPDERSEFLKVLRGMEPKGVILSENNMECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKNRDSDERRMMEGEAAKALTNQREMNERREKWCERMKKTGFAGEVFGEDAIDGGRALLRKYDNNWDMKVEENSTSVELWWKSQPVSFCSLWKLEKQPE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04132 554 ProSiteProfiles GRAS family profile. 159 548 IPR005202 -
Mepo1g04132 554 MobiDBLite consensus disorder prediction 76 94 - -
Mepo1g04132 554 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 538 IPR005202 -
Mepo1g04132 554 MobiDBLite consensus disorder prediction 76 165 - -
Mepo1g04132 554 Pfam GRAS domain family 169 548 IPR005202 -
Mepo1g04132 554 MobiDBLite consensus disorder prediction 149 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04132 Mepo-Chr1 48084244 48086043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04132 2 548 GRAS Transcription Factor Family AT3G13840 50.361 8.90e-176 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo1g04132 GRAS 1.1e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04132 - - mtr:11434050 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04132 1 48084244 48086043 Mepo1g04132 1 48084244 48086043 ECH
Mepo1g04132 1 48084244 48086043 Mepo6g04044 6 52714940 52716883 PCT