Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04126 ATGCCTTCAAAGAAAATTCAATGGAAATCATTTGTACTTGGTTGTTTCAAGGACAAAAACCCTTCATTGGAAACACCAAAATTTGTGTCAAAAAAGACAGGTTCAAGTAGAATTTCCCTATCTGATTTAAGTGATTATTCATCACCTTCTGTCATGAGTGATTTATCCAATTCATTAGTGGGATCAAATCTTCATATTTTCACTTGCAAGGAACTCCAAGAAATCACAAACAACTTTGACAAATCAAATTTTCTTGGAGAAGGTGGATTTGGAAAGGTGTACAAAGGTTTTATTGATGATAAACTTAGGCCTACACTTGTTCCTCAAGCTGTGGCTGTTAAGGCCTTAAACTTGGATGGAAAACAAGGCCATAGAGAGTGGTTGGCTGAAGTTATCTTTTTGGGGCAGTTGAAGCATCGCAATCTTGTTAACTTAATTGGCTATTGCTATGAAGATGAACATAGACTTCTTGTGTATGAATACATGGAGAGAGGAAGTCTTGAAGAAAAACTTTTCAAAGGTTATTTAGCAACTTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCTAAAGGACTAGCTTTTCTTCATGAAGAGGAGAAACCAGTTATATATAGAGATGTCAAAGCCTCAAACATTCTATTGGATGCTGATTACAATGCTAAGTTGTCAGATTTTGGTTTAGCAATAGATGGACCAGATAAAGATCAAACACATATTACAACTCGTGTGATGGGTACACATGGATATGCTGCTCCTGAATACATCAATACAGGTCGTTTGACAACAATGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTAGAGCTATTAACAGGAAAGAAATCAGTGGACAAAAAAAGAACTCCAAGAGAGCAAGATTTAGTAGAATGGGCAAGGCCATCATTGAAGGATTCACACAGACTTGAAAGGATAATTGATTCAAGACTAGAGGATCAATACTCAATTGATGGTGCTAGAAAATTAGCAATCTTGACTTATCAATGTCTAAGTCATCATGATAAAAGTAGACCAACAATGAGAACAGTTGTTAAGACCTTACAGCATGTCATGAAATTAAATGACATTCCAATTGGTCATTTTGTTTATGTAGCTCCTATTGAGGTAACAAATATTGAAGTGTCACTAAATGTGGATAAAAAAGGAAATGAAAATGAATGTGATGAAAATGAGATCAACAAAAGTGTTGTGAAAAGTAAAAATGAAGAAAAGGGTCATCAAATTCAGCGTAGAAGTCGCAGCAATCGACGCCGGGTTAAGCCATTGATGAAGTCTCGTTCTGTTCACTCTGATACTGCTCTGTATAAGACTCTTGGAACTAGTTTGTACTCACCCAAGCAAAGCAAGGAGAGCCAACAAGAAGTAAACCTTTGCCAATATTAG 1410 0.3603 MPSKKIQWKSFVLGCFKDKNPSLETPKFVSKKTGSSRISLSDLSDYSSPSVMSDLSNSLVGSNLHIFTCKELQEITNNFDKSNFLGEGGFGKVYKGFIDDKLRPTLVPQAVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCYEDEHRLLVYEYMERGSLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDKDQTHITTRVMGTHGYAAPEYINTGRLTTMSDVYSFGVVLLELLTGKKSVDKKRTPREQDLVEWARPSLKDSHRLERIIDSRLEDQYSIDGARKLAILTYQCLSHHDKSRPTMRTVVKTLQHVMKLNDIPIGHFVYVAPIEVTNIEVSLNVDKKGNENECDENEINKSVVKSKNEEKGHQIQRRSRSNRRRVKPLMKSRSVHSDTALYKTLGTSLYSPKQSKESQQEVNLCQY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04126 469 PANTHER OS01G0588500 PROTEIN-RELATED 46 359 - -
Mepo1g04126 469 SMART serkin_6 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04126 469 Gene3D Phosphorylase Kinase; domain 1 45 161 - -
Mepo1g04126 469 SUPERFAMILY Protein kinase-like (PK-like) 52 356 IPR011009 -
Mepo1g04126 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mepo1g04126 469 ProSiteProfiles Protein kinase domain profile. 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04126 469 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 162 365 - -
Mepo1g04126 469 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Mepo1g04126 469 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Mepo1g04126 469 MobiDBLite consensus disorder prediction 408 439 - -
Mepo1g04126 469 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Mepo1g04126 469 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Mepo1g04126 469 CDD STKc_IRAK 85 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04126 Mepo-Chr1 48025505 48028235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04126 65 390 Glycoside Hydrolase AT3G07070 46.988 2.63e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo1g04126 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04126 - - gmx:100790454 666.766