Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04110 ATGGGCACTCACCCTGATGCGGCTCAGCTAATGTCCATACTCTTGAAGCTGCTGAATGCTAAAAAAACAATTGAAATTGGAGTTTTTACTGGATACTCTCTTCTCCTCACAGCACTTAACATTCCTGATGATGGAAAGATTATAGCTGTGGATCCAGACAGAAAAGCTTATGAAGTAGGACTTCCATTCATCAAACAGGCTGGTGTAGAACACAAAATTGACTTCATAGAGTCTCCAGCATTACCAGTTCTTGATAAACTCTTAGAAGATCCTTCAAATGATGAAAATTTTGACTTTGCCTTTGTTGATGCTGATAAACAAAATTACTTGAATTACCATGAGAGGCTTATTAAACTGATTAAGATTGGTGGATTAATTATCTTTGATAACACCCTTTGGGGTGGAACTGTTGCATGGCCTGAAGAAGCTCTTCTAGATCCCAGGAGAAAAAAAATAAGGCAAGATGCACTTGCTTTCAACAATGCAATTGCAAGTGACACTCGTATTGAAATTTGTCTTGCTTCAATTGGTGATGGTTTCACTATTTGTAGGCGTGCTCATTGA 564 0.383 MGTHPDAAQLMSILLKLLNAKKTIEIGVFTGYSLLLTALNIPDDGKIIAVDPDRKAYEVGLPFIKQAGVEHKIDFIESPALPVLDKLLEDPSNDENFDFAFVDADKQNYLNYHERLIKLIKIGGLIIFDNTLWGGTVAWPEEALLDPRRKKIRQDALAFNNAIASDTRIEICLASIGDGFTICRRAH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04110 187 Pfam O-methyltransferase 1 185 IPR002935 GO:0008171
Mepo1g04110 187 Gene3D Vaccinia Virus protein VP39 1 187 IPR029063 -
Mepo1g04110 187 CDD AdoMet_MTases 24 128 - -
Mepo1g04110 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 185 IPR029063 -
Mepo1g04110 187 PANTHER O-METHYLTRANSFERASE-RELATED 1 186 - -
Mepo1g04110 187 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 186 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04110 Mepo-Chr1 47776359 47778189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04110 1 187 Monolignol Biosynthesis Gene Families AT4G26220 60.963 9.40e-84 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04110 K00588 - gmx:100792717 303.138