Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04100 ATGGCCATAGCAGTTCCTGCAATTTTCCATCCATCATTCTTCATCTTGATCTTCAACATTATCATAAATTTTTCTATGATATATTCTCTGTCAGAAACAGAAGCTTTATTAACTCTAAAAAACTCATTCTCAAATGGTAATGCTCTAAAAAGTTGGATTGCCAACACTTTACCTTGTGCCGAAGACGATCAATGGGAAGGCGTTGTTTGTTACAACGGTCTTGTAACCGGTCTGCGCCTCGAAGGAATGGGATTATTCGGCAAAATTGATGTTGATGCATTGCTTGAACTTAAAGGTTTAAGAACTATTAGTTTTATGAACAATTCTTTCACTGGTTTGATACCAGAATTGAATCGAATTGGTTTCTTGAAAGCGATGTTTTTGTCTGGAAACAAATTTTCAGGACATATTCCTAAGGAATATTTTCTAAGAATGAAATCATTGAAGAAAGTTTGGTTATCTAATAATGAATTTACAGGTGATATTCCATCATCATTGGCTGAAATTCCTCAACTTGTTGAATTACATCTTGAAAAAAATCAGTTTAGTGGTAATATTCCAAATTTGAATAATCCTTCATTGGTGATATTTGATGTTTCAAACAATAATTTGGAAGGTGAAGTTCCTCAAGGTTTGTTGAGATTCAATGGGAATTCTTTTTTAGGAAATTCTGGTTTATGTGGCGAAAAAATCGGCAAAGTATGTGGACAACAACCAGTGCAACAACCAAAACCTATTGATGCACATAATATTAGTAATACAGCAGTAGCAGTTACCAACAATAATGCTAGTAATGTGATTGTGACTGTGCTTGATAAAAGTAAGCATAAGTCATTGCAGATTATTGGTATTGTTATAACAAGTGTAGTAATAATTTCACTAGCTATATTTTTGATTATCAAATCAAGAAAAAAGAAAAAGGAGGGTAAATTTGATGATATTATTGGTGAGAAATATGAAAGAGAAAATATAAATGACAGTGGTAGTTTTGAAGTTCAAGTAAGTAGTAGTAATAGTATTACTAGTAGTACTAATCAAGAGAAAAGAGATATGAATTTTGTGAAAAAATCATCTAGTAAAAGAGGTTCATCTCAAGGTAGTAAAGGGATAGGTGAGCTTGTGATGATGAATAATGAGAAGGGTGTGTTTGGTTTGCCTGATTTGATGAAAGCTTCTGCTGAAGTTCTTGGAAATGGAGGGTTTGGATCATCTTATAAAGCTGTGATGGCTAATGGTGTTGCAGTGGTTGTGAAAAGGACTAGAGAATTGAATGCTTTGGGAAAAGATAGTTTTGATGCTGAGATGAAAAAGCTTGGAAGGTTAAAACATTGGAATGTTTTGACACCTTTGGCTTATCATTACAGAAAAGATGAGAAATTAGTCATCTCTGAGTATGTTCCTAGAGGAAGTCTACTCTATTTGCTGCATGAACTAGATTGGAACACACGTTTAAAGATAGTACAAGGAATTGCAAAAGGAATGCAATATCTTCACATTGAATATTCTTCATCTGATCTACCACATGGAAACTTAAAATCAAGCAATGTTCTACTTGGACCAGCTTATGAACCATTACTCATAGATTATGGTTTCATCCATCTAGTTAACCCTTCAAGTTTTATAAACACATTATTTGCTTTTAAAGCACCAGAAGCATTACAACACAACCAAATTTCGCCTCGTTGTGACGTATACTGTCTCGGTGTAGTCATACTCGAAATACTAACCGGAAAATTTCCTTCTCAATATCTTGGTAACGGTAAAGGCGGAACCGATGTAGTACAATGGGTAGCATCAGCAATTTCTGAAGGAAGAGAAGTTGAACTACTTGATCCTGAAATTGCAAGTAATAAAAATTCATTAGGTGAAATGAAACAACTTGTTCATATTGGTGCTGCTTGTACTGAAAGTAATCCTCAAAACAGATTAGATATGATGGAAGCAGTTAGAAGAATAGAAGAGATTAAAGCAAATGGTGTTGATCAAGTTCAAAAATCAAGAACAATAGAGGTTTTACCCTCTCTTAGAGAGGGTTTTGGTGATCCTTCTCAAGCATATGATAATCAAGGGCATGTTGTTGATCAATCAAATAAGAGACATGGAACAAGTAGTTTTGGTAGTAAGGATAATTTTGAATTTGGCATCTCCTAA 2151 0.3403 MAIAVPAIFHPSFFILIFNIIINFSMIYSLSETEALLTLKNSFSNGNALKSWIANTLPCAEDDQWEGVVCYNGLVTGLRLEGMGLFGKIDVDALLELKGLRTISFMNNSFTGLIPELNRIGFLKAMFLSGNKFSGHIPKEYFLRMKSLKKVWLSNNEFTGDIPSSLAEIPQLVELHLEKNQFSGNIPNLNNPSLVIFDVSNNNLEGEVPQGLLRFNGNSFLGNSGLCGEKIGKVCGQQPVQQPKPIDAHNISNTAVAVTNNNASNVIVTVLDKSKHKSLQIIGIVITSVVIISLAIFLIIKSRKKKKEGKFDDIIGEKYERENINDSGSFEVQVSSSNSITSSTNQEKRDMNFVKKSSSKRGSSQGSKGIGELVMMNNEKGVFGLPDLMKASAEVLGNGGFGSSYKAVMANGVAVVVKRTRELNALGKDSFDAEMKKLGRLKHWNVLTPLAYHYRKDEKLVISEYVPRGSLLYLLHELDWNTRLKIVQGIAKGMQYLHIEYSSSDLPHGNLKSSNVLLGPAYEPLLIDYGFIHLVNPSSFINTLFAFKAPEALQHNQISPRCDVYCLGVVILEILTGKFPSQYLGNGKGGTDVVQWVASAISEGREVELLDPEIASNKNSLGEMKQLVHIGAACTESNPQNRLDMMEAVRRIEEIKANGVDQVQKSRTIEVLPSLREGFGDPSQAYDNQGHVVDQSNKRHGTSSFGSKDNFEFGIS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04100 716 Gene3D Phosphorylase Kinase; domain 1 389 465 - -
Mepo1g04100 716 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 659 IPR046959 -
Mepo1g04100 716 ProSiteProfiles Protein kinase domain profile. 390 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04100 716 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Mepo1g04100 716 Pfam Protein kinase domain 394 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04100 716 MobiDBLite consensus disorder prediction 696 716 - -
Mepo1g04100 716 SUPERFAMILY L domain-like 59 214 - -
Mepo1g04100 716 MobiDBLite consensus disorder prediction 335 370 - -
Mepo1g04100 716 Gene3D Transferase(Phosphotransferase) domain 1 466 672 - -
Mepo1g04100 716 MobiDBLite consensus disorder prediction 696 710 - -
Mepo1g04100 716 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mepo1g04100 716 SUPERFAMILY Protein kinase-like (PK-like) 394 652 IPR011009 -
Mepo1g04100 716 Gene3D Ribonuclease Inhibitor 142 374 IPR032675 -
Mepo1g04100 716 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04100 Mepo-Chr1 47658769 47661124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04100 20 655 Receptor kinase-like Gene Family AT3G42880 45.537 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo1g04100 Pkinase 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04100 - - tpra:123886727 1048.11