Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04099 ATGTCAAATTTAGCTAATACTGTCTCAGATGGCCGGAGACTCACCGGTAAGGCACCTGAGAAGTTCAAATTTTCACAGACTTGTAGTCTTTTGAGTCAGTTCTTGAAGGAAAAGAGAATTTCTGGTGATTCTACACCTGCTTTCTTTGGGAAAATGGAACCTAAAGCAAGTACAAAGGATTTGTTAGCCAACATGCAAAACTCAGATGGGGGTTTGAGACTAAATGCATCTGCTATTGAATCTCTTCCTCAGCTTGTGGAAAATCCTTGCATTAAGAAGTCTAATACAAGATCAACAGATCCTAAAACTCCACAATTGACGATATTCTATTCCGGGAAAATGTTAGTATTTGACGCTTTTTCACCTACGAATGCAACCGAGATCATGGAGTTGGCCACCAAATTAGCCTCTGAAAATCCAAGCACTGAAGAAAATCCCCCAAGCGCACCAGTCACTAGTGAAAAATTAAAGGAGTCCGAAATTCCTCAAACAAACACTGCCTTAGAAACAACCGAACAAGGAAACCAAGCCAAATGTTCAGATATGAGATATCCAAGAAGAGCTTCACTTCTGAAATTCCTTGAGAAAAGAAAAGAAAGGGTCATTGCTAGAGGACCTTATCAAATTAACGGTCCCAAAAACGAGGGTAGTAGTTCTGGAAGTGAACCTAAAGATCATTCTTCCGATCAATTCGACCTTAACTTATAG 708 0.3983 MSNLANTVSDGRRLTGKAPEKFKFSQTCSLLSQFLKEKRISGDSTPAFFGKMEPKASTKDLLANMQNSDGGLRLNASAIESLPQLVENPCIKKSNTRSTDPKTPQLTIFYSGKMLVFDAFSPTNATEIMELATKLASENPSTEENPPSAPVTSEKLKESEIPQTNTALETTEQGNQAKCSDMRYPRRASLLKFLEKRKERVIARGPYQINGPKNEGSSSGSEPKDHSSDQFDLNL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04099 235 Pfam Jas motif 186 208 IPR018467 -
Mepo1g04099 235 MobiDBLite consensus disorder prediction 136 183 - -
Mepo1g04099 235 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Mepo1g04099 235 MobiDBLite consensus disorder prediction 201 235 - -
Mepo1g04099 235 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 218 IPR040390 -
Mepo1g04099 235 SMART tify_2 99 134 IPR010399 -
Mepo1g04099 235 MobiDBLite consensus disorder prediction 219 235 - -
Mepo1g04099 235 MobiDBLite consensus disorder prediction 157 178 - -
Mepo1g04099 235 Pfam tify domain 101 132 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04099 Mepo-Chr1 47634366 47637039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04099 12 217 Tify Gene Family AT1G19180 31.330 9.33e-19 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo1g04099 tify 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04099 K13464 - gmx:100778559 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04099 1 47634366 47637039 Mepo1g04099 1 47634366 47637039 ECH