Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04087 ATGGCGACCAAACAAGATTCACCAATAGAGATTCACGAAATCATCACCGAATCTGAAGGATCCGATCCATATTCAGAATGCGACGATTCAGAAGAAGATCCTGATTTCGACATGCTTGAAGAAACCCATCGTAGCTTCTCCAATCTCTCACTCAAAAACAAGGCAAAAAAGCGCATAGTTGATGATAAGGGTCTGGCTGGTGAGATGAATGCAGAAGTGTTGGAGATGAATGCACCTTCTCTTGATGATGATGGTTTTGAAAAAGTTCAGAAAATAATAAAGGCTGGACTGTTAGAGAAATTGAAAGTGGATGAATGCAAGATGTATTTGAAGAAGAATGGTCTGAGACTAACTGGGAATAAGGACACACTTATCCAGCGCATAAAGGAGCATCAAGAGATTATAAATGGTGGAGGGGAGAAAAAGTACCTGCCTCATAGCTTTGTGTTAAATTGTAAAGGTGATGCATGCACCGGTGATGTTGTTTTGTTTGAGCAAAATGTGTATGAAATGTTCAACATAGCATCTAGGAGTGGTGGCGGTCCACCGTGTGGCAAAAGGATTGTTACAGGCCGCATAGTGAAAGAAAGTTATGGTGCTGCCAAGCAACAGCATACATTTACAATTGAAGTGCTGTGGAGCAAGGGAGAAAAGCCTCTCCCTCCCCTTCACCCCTTACTGATTAAGGGTCGAAACCTTTATCGGTTGAAGACTTTGAGACAGAAATGGGAGGATGAAGGGAAAAGGCAAAAACTGTTAATGGAAAAACACTCTCGGGGATCCGTTGCTAGGGCAGACAGGGAAGCAAGGATACAGGAAAAGGAGATGAGAAAATCAATGAAGGAAAATAGGATCTCCAAAAAGGATTCAGCAAAGAATCAATTCCAATCACATTCATCCATTGCAAGGTCACAAAATCAACCTCAAGAAGCAACAACTGTATTCATAAATCCAAAAAAATCCGAATTTCCATCCCAACACTCAGCTTTATCAACACCGGCAATTGTAAATAAACCAGCAGCTGTAACTGAACAACGCGTTCAGCCTACATATTCTCGAAATGTTCTAATGGGGTCAGACCAGCTCAGAAATTCAGGAAAATCATCTTTTATCGCAAACAACTATTATGCCGACTACCATTACAGAGACAACCCAACTAGTACTGCTGAGAGATACAATGCTTTCATTGCAGAGACAAACAGGAGAGCTTCTTACCAAAGGAAGCCTTTGACAAATGCAAATCACTTTATTCCGCGTTCGGGAAATGCAAGCCACTTTATCCCGCGTTCGGAAAATGCAAATCACATGCATACATTGATCCCAAACAGAGAAAGCTATCAACAAAAACAGTTTTGTAGACATTTTGCACGTGGAAGGTGCCATTTTGGAGATAACTGCAAATTCTTACACGGTTGA 1416 0.4131 MATKQDSPIEIHEIITESEGSDPYSECDDSEEDPDFDMLEETHRSFSNLSLKNKAKKRIVDDKGLAGEMNAEVLEMNAPSLDDDGFEKVQKIIKAGLLEKLKVDECKMYLKKNGLRLTGNKDTLIQRIKEHQEIINGGGEKKYLPHSFVLNCKGDACTGDVVLFEQNVYEMFNIASRSGGGPPCGKRIVTGRIVKESYGAAKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRLKTLRQKWEDEGKRQKLLMEKHSRGSVARADREARIQEKEMRKSMKENRISKKDSAKNQFQSHSSIARSQNQPQEATTVFINPKKSEFPSQHSALSTPAIVNKPAAVTEQRVQPTYSRNVLMGSDQLRNSGKSSFIANNYYADYHYRDNPTSTAERYNAFIAETNRRASYQRKPLTNANHFIPRSGNASHFIPRSENANHMHTLIPNRESYQQKQFCRHFARGRCHFGDNCKFLHG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04087 471 Coils Coil 262 282 - -
Mepo1g04087 471 Pfam SAP domain 98 131 IPR003034 -
Mepo1g04087 471 SUPERFAMILY CCCH zinc finger 447 471 IPR036855 GO:0046872
Mepo1g04087 471 MobiDBLite consensus disorder prediction 275 309 - -
Mepo1g04087 471 PANTHER SAP DOMAIN-CONTAINING PROTEIN 16 471 - -
Mepo1g04087 471 ProSiteProfiles Zinc finger C3H1-type profile. 446 471 IPR000571 GO:0046872
Mepo1g04087 471 MobiDBLite consensus disorder prediction 1 33 - -
Mepo1g04087 471 Pfam CCCH-type zinc finger 452 471 IPR041367 -
Mepo1g04087 471 Gene3D - 437 471 - -
Mepo1g04087 471 SUPERFAMILY SAP domain 88 132 IPR036361 -
Mepo1g04087 471 MobiDBLite consensus disorder prediction 275 291 - -
Mepo1g04087 471 SMART sap_9 98 132 IPR003034 -
Mepo1g04087 471 Gene3D SAP domain 89 142 IPR036361 -
Mepo1g04087 471 ProSiteProfiles SAP motif profile. 98 132 IPR003034 -
Mepo1g04087 471 MobiDBLite consensus disorder prediction 292 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04087 Mepo-Chr1 47508412 47512646 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo1g04087 SAP 6.1e-09 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04087 - - gmx:100815642 553.518