Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04085 ATGGCTGATTCTTCCTTTGAGATAGACAATCCGAGAAGACACTATCCAACTCCAGTGAGTTATCAAAGTGTATCTGGCTCTAGCTCCTTCATAAATTCTGCTTCTCGAAGCAACGCAACTCCAAGAACGAGAAGAACTCGTCGCAACAGAATTCCATCCACACCGTTTGCCTCAGACGACGATCGTTCATGGCAGGGTGAAGTTTCGTGGAAGTTTGAACCAACCGGGTTGCGTGAACATAGCACAAACTTTGGTTCTGTTCTTAGTCCATGGCCAACCAACTCTACCTCTGATCGTAGCCGTGTGTTTCGCCAATCGGCTAATGACTATTACCTTTCGAGAATAGGTGGTTTTCGTGGCAATACAAACTCATCACATGATCATTCTTCCTATGGAAGAGTTGAACTTAGAAGCCATGTTGCTAGGGCCACCAATGATCATAGTTATTTTGATCAATACAGTGGATTCTCCAAATTGGGAATCATCAAAGAAGGAGTTAATAGTGGAAATCGCCACATTAATAATAAGGCTAGTCCATTAGCCGAGGAAGATGAGCTCAGTGCGATCGATTATAGTATATCAGATGAACATGTTAAACATGATCATGGTCATGGTCATGGTCATGGAGTACCATCATATGGTAGAAAATCTCCTAGCCAAATATATGGTGGTGGTGGTTATAGTCACTATGAGAGTAAAATGGCATCAGGATATGATGATGATGAAGGTGATGAGGATATGGATGAGGACGAGGATGATGTTGTTGGTCCTCCAAAGAATGTTGGATTGTTTAGCTTGTTTAGGTATACAAGAAATTGGGATTGGTTACTTGTGTTTATTGGTTGTATAGGAGCTCTTATAAATGGAGGATCACTTCCTTGGTATTCTTATCTTTTCGGAAACTTGGTTAACAAGCTTTCAAGAGAAGCAAAAAATGATAAACCTCAGATGTTGAAGGATGTAGAACAGATATGTATATTTATGACTGGCTTAGCTGCAGTTGTGGTAGTTGGAGCCTATATGGAGATCACATGTTGGAGGTTAGTTGGGGAAAGATCTGCTCAAAGAATTAGAACTGAATATTTAAGAGCAATTCTTAGACAAGACATAAGTTTTTTTGATACAGATATCAATACTGGTGATATTATGCATGGAATTGCTAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGAGAAGATGGCTCACTTCATTCATCATGTATTTACATTCATATGTGGATATGCAGTTGGGTTTAGAAGATCATGGAAAGTGTCATTGGTTGTATTCTCAGTCACACCATTAACAATGTTCTGTGGTATGGCTTACAAAGCACTTTATGGTGGTCTAACAGCTAAAGAGGAAGCTTCTTATAGGAAAGCTGGAAGCATTGCAGAACAAGCCATCAGTTCAATTAGGACAGTGTTTTCTTTTGTAGCTGAAAGCCAATTGGGTGAAAAATATTCAGAACTACTTGAAAAATCAGCTCCAATTGGTGCTAAAATTGGTTTTGCAAAAGGTGCAGGAATGGGTGTTATCTACTTAGTAACATATTCAACATGGGCTTTGGCTTTTTGGTATGGTTCTATCTTAATTGCTAGGGGTGAACTTGATGGTGGTTCAGCTATTGCTTGTTTCTTTGGTGTCAATGTTGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCACAATTTGCACAAGGTACAGTTGCAGCAAGCCGTGTATTCTATATTATAGAAAGAGTTCCTGAGATTGATCCATATAATCCTGAGGGTAGGAAGCTTTCATCTGTTCGTGGAAGGATTGAGTTAAAGAATGTTATTTTTGCATATCCATCTCGTCCTGATTCACTTATACTTAATTCCATTAATTTGGTATTTCCATCTTCAAAAACTTTGGCATTGGTTGGTGCAAGTGGAGGAGGAAAATCAACTATCTTTGCTCTCATTGAGAGGTTCTATGACCCTATAGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACACTGCAAGTAAAGTGGTTAAGGGATCAAATTGGGATGGTTGGTCAAGAGCCAATTCTTTTTGCTACATCCATACTTGAAAATGTGATGATGGGGAAAGATAATGCCACCAAGGAAGAGGCAATTTCTGCTTGCATTGCTGCTGATGCTCACAATTTCATCTCTAAGCTGCCACTTCGTTACGACACTCAGGCTGGTGATAGAGGTACAAAACTTTCAGGAGGTCAAAAGCAGAGAATTGCATTGGCTAGAGCAATGATAAAAAATCCTAAAATCCTTCTTTTAGATGAACCTACCAGTGCTCTTGATGCCGAGTCAGAAGCTGCAGTTCAAAGGGCTATTGACAAGATTTCAGCAGGCAGAACAACCATTGTCATTGCTCATAGGATAGCAACAGTGAAGAATGCTGATGCCATTGTAGTTCTTGAACATGGTTCTGTCACCGAGATTGGCGACCATCGCCAGCTTATGTCGAAAGCCGGAACCTACTACAACCTTGTCAAACTTGCAACTGAATCCATTTCAAAACCTCTTCCTACAGAAAATAACATGCAAAAAACCAAAGATCTATCATCCATCAATAATAAATATGCTCCTGATGTAGCAAAGTCAAGTTATCTAGTCGATATCTCACGCTCTAAATTGGAAGATTCAATGCAGGATGAGAATCAAGAAGATATTGAAGATAAGCAATATAAAAAGTCAAGAAATTACAAACTTTCTGAGGTATGGAAATTGCAAAAGCCGGAGTTTATGATGCTAATTTCAGGCCTAGTTATGGGAATGTTTGCCGGCGCTTGTCTTTCCCTTTTTCCATTGGTTTTAGGCATATCCCTTGGAGTATATTTTAGCGACGACACTTCAAAAATGAAAAGAGATGTAGGGTACCTTTGTTTAGTACTTGTCGGCCTTGGATTTGGCTGCATACTCTCCATGACAGGACAACAAGGTCTATGTGGTTGGGCAGGTTCAAAGCTAACACTGAGAGTTAGGAACCTCTTGTTTCAATCCATACTTATACAAGAACCTGGATGGTTTGATTTTGATGAAAACTCAACCGGTGTATTGGTGTCAAGACTTTCGATAGACGCGGTTAGTTTTCGTTCGGTACTCGGTGACAGATTCTCGGTACTTCTAATGGGATTGAGTTCGGCTGCTGTTGGACTTGGTGTGTCCTTTGTATTTAATTGGGAACTAACACTTGTTGCAGCTGCTGTAACTCCTTTAACCCTTGGTGCAAGTTACATAAACTTGATCATAAACATCGGTCCGAAAATCAATAACAACTCTTATGCAAGAGCAAGCAATATTGCTTCAGGTGCAGTTTCAAATATAAGGACAGTTGCTACATTTTCTGCTCAGGAACAGATAGTTAATGCCTTTGATAAAGCCTTATCAGAACCTAGGAAAAAATCATTAAAAAGTTCACAGCTTCAAGGTCTTGTATTTGGATTATTTCAAGGTGCTATGTATGCAGCATACACATTAACTCTTTGGTTTGGTGCTTACCTTGTAAAAAATAATAGAGGAGATTTTGACGATGTTTATAAGATTTTTCTCATTCTTGTTTTGAGTTCATTTTCTGTTGGACAACTAGCTGGTTTAGCACCTGATACTTCTATGGCTGCTAGCTCAATTCCTGCAGTTCAAGATGTTATAAACAGAAAACCATTGATAGGAAATGATGGAAGAAAAACTAAGAAAGTTGATAGATCAAAGGCTTTCAAAATAGAATTCAAAATGGTGACATTTGCATATCCATCAAGGCCTGAGGTAACTGTGCTGAGGAATTTCTGTGTAAAGGTTCAAGGTGGAAGTACCGTGGCTTTGGTGGGACCAAGTGGATCAGGAAAATCAACAGTTGTGTGGTTGACTCAGAGATTCTATGATCCTGATCAAGGAAAGGTTATGATGAGTGGTGTGGATTTGAGGGAGATTGATGTGAAGTGGTTGAGGAGACAAATTGCTTTGGTTGGTCAAGAGCCTGCACTTTTTGCTGGGAGTATAAGGGAAAATATTGCATTTGGGGACCAAAGTGCTTCTTGGGCTGAAATTGAAGCTGCTGCAATGGAGGCTTACATTCATAAGTTCATCAGTGGCCTTCCTCAAGGTTATGAAACACAGGTTGGTGAAAGTGGAGTCCAATTATCAGGTGGACAAAAACAAAGGATAGCTATAGCAAGAGCAATATTGAAGAAATCAAAGGTACTTCTACTTGATGAAGCAAGCAGTGCATTAGATTTGGAATCAGAAAAACACATCCAAGAAGCTCTCAAGAATGTTTCCAAAGAGGCAACAACTATAATAGTTGCACACCGTCTATCTACAATCAGAGAAGCTGATAAAATTGCAGTTATGAGAAATGGAGAAGTAGTTGAGTATGGTAGCCATGACACTCTCATTTCTTCCATTCAAAATGGTTTGTATGCTAGCCTTGTCAGAGCTGAGACTGAAGCTAATGCATTTTCTTAA 4482 0.3951 MADSSFEIDNPRRHYPTPVSYQSVSGSSSFINSASRSNATPRTRRTRRNRIPSTPFASDDDRSWQGEVSWKFEPTGLREHSTNFGSVLSPWPTNSTSDRSRVFRQSANDYYLSRIGGFRGNTNSSHDHSSYGRVELRSHVARATNDHSYFDQYSGFSKLGIIKEGVNSGNRHINNKASPLAEEDELSAIDYSISDEHVKHDHGHGHGHGVPSYGRKSPSQIYGGGGYSHYESKMASGYDDDEGDEDMDEDEDDVVGPPKNVGLFSLFRYTRNWDWLLVFIGCIGALINGGSLPWYSYLFGNLVNKLSREAKNDKPQMLKDVEQICIFMTGLAAVVVVGAYMEITCWRLVGERSAQRIRTEYLRAILRQDISFFDTDINTGDIMHGIASDVAQIQEVMGEKMAHFIHHVFTFICGYAVGFRRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAISSIRTVFSFVAESQLGEKYSELLEKSAPIGAKIGFAKGAGMGVIYLVTYSTWALAFWYGSILIARGELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFYIIERVPEIDPYNPEGRKLSSVRGRIELKNVIFAYPSRPDSLILNSINLVFPSSKTLALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDNATKEEAISACIAADAHNFISKLPLRYDTQAGDRGTKLSGGQKQRIALARAMIKNPKILLLDEPTSALDAESEAAVQRAIDKISAGRTTIVIAHRIATVKNADAIVVLEHGSVTEIGDHRQLMSKAGTYYNLVKLATESISKPLPTENNMQKTKDLSSINNKYAPDVAKSSYLVDISRSKLEDSMQDENQEDIEDKQYKKSRNYKLSEVWKLQKPEFMMLISGLVMGMFAGACLSLFPLVLGISLGVYFSDDTSKMKRDVGYLCLVLVGLGFGCILSMTGQQGLCGWAGSKLTLRVRNLLFQSILIQEPGWFDFDENSTGVLVSRLSIDAVSFRSVLGDRFSVLLMGLSSAAVGLGVSFVFNWELTLVAAAVTPLTLGASYINLIINIGPKINNNSYARASNIASGAVSNIRTVATFSAQEQIVNAFDKALSEPRKKSLKSSQLQGLVFGLFQGAMYAAYTLTLWFGAYLVKNNRGDFDDVYKIFLILVLSSFSVGQLAGLAPDTSMAASSIPAVQDVINRKPLIGNDGRKTKKVDRSKAFKIEFKMVTFAYPSRPEVTVLRNFCVKVQGGSTVALVGPSGSGKSTVVWLTQRFYDPDQGKVMMSGVDLREIDVKWLRRQIALVGQEPALFAGSIRENIAFGDQSASWAEIEAAAMEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSKVLLLDEASSALDLESEKHIQEALKNVSKEATTIIVAHRLSTIREADKIAVMRNGEVVEYGSHDTLISSIQNGLYASLVRAETEANAFS 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04085 1493 Gene3D ABC transporter type 1, transmembrane domain 265 847 IPR036640 GO:0005524|GO:0016020
Mepo1g04085 1493 Pfam ABC transporter 621 770 IPR003439 GO:0005524
Mepo1g04085 1493 Gene3D ABC transporter type 1, transmembrane domain 1098 1243 IPR036640 GO:0005524|GO:0016020
Mepo1g04085 1493 Gene3D ABC transporter type 1, transmembrane domain 873 1090 IPR036640 GO:0005524|GO:0016020
Mepo1g04085 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1247 1483 IPR003439 GO:0005524
Mepo1g04085 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 279 568 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04085 1493 PANTHER ABC TRANSPORTER B FAMILY 246 982 IPR039421 -
Mepo1g04085 1493 SUPERFAMILY ABC transporter transmembrane region 913 1227 IPR036640 GO:0005524|GO:0016020
Mepo1g04085 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 839 IPR027417 -
Mepo1g04085 1493 MobiDBLite consensus disorder prediction 16 40 - -
Mepo1g04085 1493 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Mepo1g04085 1493 FunFam ABC transporter B family member 19 265 599 - -
Mepo1g04085 1493 Pfam ABC transporter transmembrane region 925 1195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04085 1493 Pfam ABC transporter transmembrane region 278 550 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04085 1493 MobiDBLite consensus disorder prediction 1 62 - -
Mepo1g04085 1493 SUPERFAMILY ABC transporter transmembrane region 260 588 IPR036640 GO:0005524|GO:0016020
Mepo1g04085 1493 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1098 1238 - -
Mepo1g04085 1493 FunFam ABC transporter B family member 1 593 841 - -
Mepo1g04085 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 603 839 IPR003439 GO:0005524
Mepo1g04085 1493 ProSitePatterns ABC transporters family signature. 1386 1400 IPR017871 GO:0005524|GO:0016887
Mepo1g04085 1493 SMART AAA_5 1274 1460 IPR003593 GO:0016887
Mepo1g04085 1493 SMART AAA_5 630 831 IPR003593 GO:0016887
Mepo1g04085 1493 CDD ABC_6TM_Pgp_ABCB1_D1_like 279 576 - -
Mepo1g04085 1493 MobiDBLite consensus disorder prediction 233 254 - -
Mepo1g04085 1493 CDD ABC_6TM_Pgp_ABCB1_D2_like 914 1229 - -
Mepo1g04085 1493 CDD ABC_MTABC3_MDL1_MDL2 603 840 - -
Mepo1g04085 1493 MobiDBLite consensus disorder prediction 238 253 - -
Mepo1g04085 1493 Gene3D - 593 841 IPR027417 -
Mepo1g04085 1493 Gene3D - 1245 1487 IPR027417 -
Mepo1g04085 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04085 1493 CDD ABC_MTABC3_MDL1_MDL2 1247 1485 - -
Mepo1g04085 1493 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Mepo1g04085 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1244 1484 IPR027417 -
Mepo1g04085 1493 FunFam ABC transporter B family member 1 1236 1487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04085 Mepo-Chr1 47493335 47501367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04085 897 1490 Calmodulin-binding Proteins AT2G36910 36.394 3.59e-106 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04085 K05658 - gmx:100816700 2236.45