Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04083 ATGGATGACGACGACGAGATCCACTCGGTTAACTCGATCCACTCGAATCCATCTCCGGTGAGTGGCTCTCCATCTCCGGTGTCGTCTCCGGGAGCGATCGGTAGAATTTCGGTGACGGTTGCGGCACCGGCGGCGAACAGCTATGCATTAGCTCTTCCGATTCAGAATACGACGACACGTGGAAGCAACGGTGGAGGGAGGGAGGATTGTTGGAGCGAAGCAGCGACGGCGGTGTTGATTGAAGCGTGGGGAGAGAGGTATTTGGAATTGAGCAGAGGGAATTTGAAGCAGAAGCATTGGAAAGAGGTTGCGGAGATTGTTAATGGAAGAGGTGATTATTTGAAAGCACCGAAAACTGATATTCAGTGTAAGAATCGTATTGATACGGTTAAGAAGAAGTATAAATCGGAGAAAGCTAAGATCGGTGCTGGAGGTGGCTCCGGCGGTGTTACAACCAGCACTTGGAGGTTTTATGATCGGTTAGATCAGTTAATCGGTCCAACCGCTAAGATCAGTGGTGTTTCCGGAAACAGTAATTTGTCACAGCAGAAAGTTCCGTTAGGAATTCCTGTTGGTATTCGCGCCTCTGGAGCCAGAGGCGCGAATCAGGTTAATTCTCAGAAGAAAGATATTCATCAAGCTCAGTTGAATTATCAGAAGATTCAGCTTCGACCACGAGTTTCTGAGCTGAATTCTTCTGATAATTCATCTGAAAAAGAAGCGTTGTCACCGGTGTCAAGCGACAGTTTACCACCACCGGAGAGGAAGAGAGCGAAAGTGATGAATTCGAATTCAAAGGGGAGAGGTTGGGGAAGTGCGGTGAGGGAATTGACTCAGGCGATTGTGAAATTTGGTGAAGCTTATGAACAAGCGGAGACGTCGAAGTTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACTCAGGTAGAGATTTCACAGTTGAAACTTGGAAGAAAAAGTGTTAATGTTAATGGTAACACAAGTAATCATCAAAACAACAACAATGTAAGCAGCAACAACAACAATAGCAACCATAACAATAACAGTGACAGTGAGTGA 1110 0.4613 MDDDDEIHSVNSIHSNPSPVSGSPSPVSSPGAIGRISVTVAAPAANSYALALPIQNTTTRGSNGGGREDCWSEAATAVLIEAWGERYLELSRGNLKQKHWKEVAEIVNGRGDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIGAGGGSGGVTTSTWRFYDRLDQLIGPTAKISGVSGNSNLSQQKVPLGIPVGIRASGARGANQVNSQKKDIHQAQLNYQKIQLRPRVSELNSSDNSSEKEALSPVSSDSLPPPERKRAKVMNSNSKGRGWGSAVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKSVNVNGNTSNHQNNNNVSSNNNNSNHNNNSDSE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04083 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 39 334 IPR044823 -
Mepo1g04083 369 MobiDBLite consensus disorder prediction 225 270 - -
Mepo1g04083 369 MobiDBLite consensus disorder prediction 11 30 - -
Mepo1g04083 369 Gene3D - 71 136 - -
Mepo1g04083 369 FunFam trihelix transcription factor ASIL2 71 136 - -
Mepo1g04083 369 MobiDBLite consensus disorder prediction 225 244 - -
Mepo1g04083 369 Pfam Myb/SANT-like DNA-binding domain 68 164 IPR044822 -
Mepo1g04083 369 MobiDBLite consensus disorder prediction 338 369 - -
Mepo1g04083 369 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04083 Mepo-Chr1 47471026 47472636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04083 34 351 Trihelix Transcription Factor Family AT3G14180 48.058 1.15e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo1g04083 Myb_DNA-bind_4 4.8e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04083 - - cam:101508093 423.705