Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04045 ATGAACAAAATAAAACAATCCCTCGCCGGAATCTCAAATTCCGGCAACAAGAAAAAACTCCTCATCTCCCTCTTTACAACCCTTCTCATTGTAGCTTCCATAGTAGCCATTGTTGCATCAACAACCAAAAACTCCAACAAAAGCAAAAACAACAGCATTGCTTCTTCTTCTCTTTCACTCTCTCACCATTCTCACGCCATACTCAAATCCGCTTGCACCACCACTCTCTACCCTGAACTATGTTTCTCAGCCATTTCCTCTGAGCCAAACATAACTCACAAAATCACCAACCACAAAGATGTAATTTCATTGTCTCTTAACATCACAACTAGAGCCGTTGAACACAATTACTTCACCGTCGAAAAACTTCTTTTGCGAAAAAGTCTTACCAAAAGAGAGAAAATTGCTCTTCATGATTGTTTGGAAACCATTGATGAAACACTAGATGAGCTCAAAGAAGCACAAAATGATCTTGTACTATACCCGAGCAAAAAGACACTTTATCAACATGCTGATGATCTTAAAACACTCATAAGTTCCGCCATAACCAATCAGGTAACTTGTTTGGATGGATTCTCTCACGACGGCGCCGATAAGGAAGTGAGGAAGGTTCTACAAGATGGCCAAATTCACGTGGAACACATGTGTAGTAATGCATTAGCCATGACTAAGAACATGACAGACAAAGACATAGCAGAATTTGAACAAACCAACATGGTGTTAGGAAGTAACAAAAATAGAAAATTATTGGAGGAGGAAAATGGAGTGGGGTGGCCGGAGTGGATATCGGCGGGGGACAGAAGACTACTTCAAGGATCGACCGTAAAGGCGGACGTGGTGGTGGCGGCAGACGGTAGCGGGAACTTTAAGACAGTGTCTGAGGCTGTGGCTGCTGCTCCTTTGAAAAGTAGTAAGAGATATGTTATCAAGATAAAAGCTGGGGTGTATAAAGAAAATGTGGAGGTGCCAAAGAAGAAAACTAATATAATGTTTTTGGGAGATGGTAGAACTAATACTATTATTACTGGTAGTAGAAATGTTGTTGATGGAAGCACCACTTTTCACTCAGCCACTGTCGCTATAGTGGGAGGAAACTTTTTAGCAAGAGATATAACTTTCCAAAACACAGCAGGACCCGCAAAGCACCAAGCAGTGGCCCTAAGAGTCGGTGCTGACCTATCAGCATTCTACAATTGTGACATCATTGCATACCAAGACACACTTTATGTTCACAACAATAGACAATTCTTTGTTAATTGTTTCATTTCAGGAACAGTTGATTTCATCTTTGGTAACTCAGCTGTTGTGTTCCAAAATTGTGACATACATGCTAGGAAACCTAATTCAGGACAAAAAAATATGGTCACAGCACAAGGTAGGGTTGATCCTAATCAAAACACTGGAATTGTGATACAAAAATGTAGAATTGGTGCAACTAAAGATTTAGAGGGTGTGAAAGGAAGTTTTCCTACTTATCTTGGTAGACCTTGGAAGGAATATTCAAGAACAGTTTTCATGCAAAGTAGTATTAGTGATGTTATTGACCCTGTTGGATGGCATGAGTGGAATGGTAATTTTGCATTGAATACTTTGGTTTATAGGGAATATCAAAATACTGGTCCTGGTGCTGGAACTTCTAAGAGGGTTACTTGGAAAGGGTTTAAGGTCATTACTAGTGCTGCTGAGGCACAAAGTTTTACTCCTGGAAGTTTTATTGGTGGGTCTAGTTGGTTGGGTTCAACTGGCTTTCCTTTCTCTCTTGGGTTGTAA 1770 0.4034 MNKIKQSLAGISNSGNKKKLLISLFTTLLIVASIVAIVASTTKNSNKSKNNSIASSSLSLSHHSHAILKSACTTTLYPELCFSAISSEPNITHKITNHKDVISLSLNITTRAVEHNYFTVEKLLLRKSLTKREKIALHDCLETIDETLDELKEAQNDLVLYPSKKTLYQHADDLKTLISSAITNQVTCLDGFSHDGADKEVRKVLQDGQIHVEHMCSNALAMTKNMTDKDIAEFEQTNMVLGSNKNRKLLEEENGVGWPEWISAGDRRLLQGSTVKADVVVAADGSGNFKTVSEAVAAAPLKSSKRYVIKIKAGVYKENVEVPKKKTNIMFLGDGRTNTIITGSRNVVDGSTTFHSATVAIVGGNFLARDITFQNTAGPAKHQAVALRVGADLSAFYNCDIIAYQDTLYVHNNRQFFVNCFISGTVDFIFGNSAVVFQNCDIHARKPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEGVKGSFPTYLGRPWKEYSRTVFMQSSISDVIDPVGWHEWNGNFALNTLVYREYQNTGPGAGTSKRVTWKGFKVITSAAEAQSFTPGSFIGGSSWLGSTGFPFSLGL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04045 589 Gene3D - 272 589 IPR012334 -
Mepo1g04045 589 NCBIfam pectinesterase inhibitor domain 55 226 IPR006501 GO:0004857
Mepo1g04045 589 Coils Coil 137 157 - -
Mepo1g04045 589 FunFam Pectinesterase 272 589 - -
Mepo1g04045 589 Pfam Pectinesterase 278 574 IPR000070 GO:0030599|GO:0042545
Mepo1g04045 589 CDD PMEI-like_3 70 227 - -
Mepo1g04045 589 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Mepo1g04045 589 SUPERFAMILY Pectin lyase-like 273 588 IPR011050 -
Mepo1g04045 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 227 IPR035513 -
Mepo1g04045 589 SMART PMEI_2 63 222 IPR006501 GO:0004857
Mepo1g04045 589 Pfam Plant invertase/pectin methylesterase inhibitor 68 222 IPR006501 GO:0004857
Mepo1g04045 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 227 IPR035513 -
Mepo1g04045 589 FunFam Pectinesterase 64 227 - -
Mepo1g04045 589 PANTHER PECTINESTERASE 34 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04045 Mepo-Chr1 47014363 47019690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04045 16 589 Carbohydrate Esterase AT3G14310 70.678 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04045 K01051 - gmx:100776623 940.258