Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g04038 | ATGAAAACAACAACCATTCTTGAATTCCTCACAATAATTGCTTTTATGGCTAACTCATTTCAAGAAAACATATCCAAGATTCTTCATAAACTCTACAAGAATCATGGTTCAGTGAAGGAAATAGATCAAGGTGAAAGTGATTGTTGTTCAGTTTGTTTAAGCCAAATGTGTAAAGGAGATAAAGTTAGGGTATTGCCTTTATGTAATCATAGGTATCATGCTGATTGTATTGGTGTTTGGTTGAAGAACAATACTACATGTCCACTTTGTAGAAGCAAAATCAGTAACCATATTAATCAGAATCAACAAAAACAGGTGAAACCCTTTCAAGAATCTTTGGTTGACCTTATACAAAGTTTCTCTGATGTACTTGTAGCTATTCTTTATATGATTCTGCCATCTAGTATCACTGAATCTTTCCCTGTAGTTTATTGA | 435 | 0.3287 | MKTTTILEFLTIIAFMANSFQENISKILHKLYKNHGSVKEIDQGESDCCSVCLSQMCKGDKVRVLPLCNHRYHADCIGVWLKNNTTCPLCRSKISNHINQNQQKQVKPFQESLVDLIQSFSDVLVAILYMILPSSITESFPVVY | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g04038 | 144 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 32 | 108 | IPR044600 | GO:0016567|GO:0016740 | |
Mepo1g04038 | 144 | ProSiteProfiles | Zinc finger RING-type profile. | 49 | 91 | IPR001841 | - | |
Mepo1g04038 | 144 | SMART | ring_2 | 49 | 90 | IPR001841 | - | |
Mepo1g04038 | 144 | Pfam | Ring finger domain | 48 | 91 | IPR001841 | - | |
Mepo1g04038 | 144 | SUPERFAMILY | RING/U-box | 38 | 99 | - | - | |
Mepo1g04038 | 144 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 16 | 98 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g04038 | Mepo-Chr1 | 46933114 | 46933952 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g04038 | 49 | 95 | C3H Transcription Factor Family | AT1G53820 | 55.319 | 1.41e-16 | 72.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g04038 | - | - | tpra:123883175 | 246.514 |