Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04032 ATGTCGGTGGATCCATGGTTGATGCTGATGCTCATGTTCATCATCAGTAGTAGCTGTACTTTTGTTATCAATGGCGACACAGATCCAAATGATGCCTCTACTTTAATGGCTCTGTTTCAGAGTATGAACTCACCGCCCCAGCTAAATTGGCCTACCAATGGTAATAATGATCCTTGTGGACAGTCTTGGACAGGCATTACTTGCTCAGGCAACCGAATCACAGAAATTAAGTTACCTGGTCGTCAACTAACCGGATCTTTGTATTACCAGCTACAATCCTTCTCAGCTCTGACCAACCTAGATTTGAGTAACAACAATCTCGGTGGCACTATACCATACTCGTTTCCTCAAACTTTGCAGCGCTTAAATCTGGCTAATAATAATTTCAATGGGGGGATACCTTATTCTTTTTCTGATATTCCTTCTCTTATAAGCCTGAATCTTGGTCACAATCAGCTCCAACAAGGACTGAATATGAACTTTCAGAAGCTTACTTCCCTTTCGACATTTGATGTTTCTTTCAATTCTTTGACCGGAGATCTTCCTCAGACTATGAACTCACTTTCAAGCATATCCACCATGAATCTACAAAACAACCAATTTACAGGAACCATTGATATCCTTGCTGATCTGCCTCTTGATAATTTGAATATAGAGAACAATCATTTTACAGGCTGGATACCAGAACAGTTGAAAAACATAAACCTACAAAAGAATGGTAATTCATGGAGCTCGGGACCTGCACCCCCACCTCCTCCTGGTACACCTCCAGTAACAAAAAACAAAGGTAATCGCAAGTCTGGTGGACATAGCCCCTCGTCAGATTCTGGCTCAAGTGATGGAAGCAAAAAATCTGGTATAGGAGGTGGTGCCATAGCTGGAATAGTGATTTCAATTTTGGTTGTTGGTGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAGAAGAAGTCGTTTGGAGATGTGGAAAAGCTAGACAACCAACCATTGGCTCCTCTTACTTCAAATGAAGTGCATGGAAGGAATTCAACGCAAACTTCTTCTGTAATTGACTTGAAGACATTTGATACTTCAGCAGCCGCAATAAGTCTTAAACCCCCTCCGTTTGATCGTAATAAATCATTTGATGAAGATGAGCTTCTGAAGAAGCCCGTCGTAGTCAAGAAGACTGTAGCACCTCCTGCAAATTTGAAATCATATTCAATAGCTGACCTACAGATTGCTACTGGAAGCTTCAGTGTGGATCATCTTCTTGGTGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGATGGACAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCCAATAACTTGTCGGATGATTTTATGGAAATAGTTTCGAACCTCTCCCGTTTGCATCATCCGAATGTGACAGAGTTAATAGGGTATTGTTCAGAGCATGGACAGCACCTCTTAGTCTATGAGTATCACAAAAATGGATCACTGCATGACTTTCTTCACCTCCCTGATGACTACATTAAACCATTGATATGGAATTCACGTGTCAAGGTTGCTTTAGGAATTGCACGCGCTTTAGAGTACTTACATGAAGTCTGTTCACCATCAGTTGTTCATAAGAATATAAAGGCAGCCAACATATTGCTTGATGCTGATCTAAATCCTCATCTTTCTGACAGTGGATTGGCCAGCTATATTCCAAATGCAAATCAGGTATTGAACAATAATTCTGGATCTGGATATGACGCTCCCGAGGTCGGATTGACTGGTCAGTATACTCTTAAGAGTGATGTCTATAGCTTTGGAGTTGTCATGTTGGAGCTTCTAAGTGGACGGAAACCATTTGATAGCTCAAGGTCGAGGTTTGAGCAGTCGTTGGTTCGATGGGCAACACCACAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTTGAAGGAATGTACCCTGTCAAGTCTCTTTCTCGATTTGCCGATGTCATTGCTCTTTGTGTTCAGTCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTAGTTCGGTTAGTGCAGCGAACCAACATGAGCAAACGGACATTTGGAACTGATCAAGGAGGATCCAACCGAGGGGGTGATGACCAAGATTCCCTAGACATGTAA 2157 0.421 MSVDPWLMLMLMFIISSSCTFVINGDTDPNDASTLMALFQSMNSPPQLNWPTNGNNDPCGQSWTGITCSGNRITEIKLPGRQLTGSLYYQLQSFSALTNLDLSNNNLGGTIPYSFPQTLQRLNLANNNFNGGIPYSFSDIPSLISLNLGHNQLQQGLNMNFQKLTSLSTFDVSFNSLTGDLPQTMNSLSSISTMNLQNNQFTGTIDILADLPLDNLNIENNHFTGWIPEQLKNINLQKNGNSWSSGPAPPPPPGTPPVTKNKGNRKSGGHSPSSDSGSSDGSKKSGIGGGAIAGIVISILVVGAIVAFFLVKKRSKKKSFGDVEKLDNQPLAPLTSNEVHGRNSTQTSSVIDLKTFDTSAAAISLKPPPFDRNKSFDEDELLKKPVVVKKTVAPPANLKSYSIADLQIATGSFSVDHLLGEGSFGRVYRAQFDDGQVLAVKKIDSSVLPNNLSDDFMEIVSNLSRLHHPNVTELIGYCSEHGQHLLVYEYHKNGSLHDFLHLPDDYIKPLIWNSRVKVALGIARALEYLHEVCSPSVVHKNIKAANILLDADLNPHLSDSGLASYIPNANQVLNNNSGSGYDAPEVGLTGQYTLKSDVYSFGVVMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGMYPVKSLSRFADVIALCVQSEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDQDSLDM 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04032 718 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Mepo1g04032 718 SUPERFAMILY Protein kinase-like (PK-like) 395 685 IPR011009 -
Mepo1g04032 718 MobiDBLite consensus disorder prediction 696 718 - -
Mepo1g04032 718 Pfam Protein tyrosine and serine/threonine kinase 415 685 IPR001245 GO:0004672|GO:0006468
Mepo1g04032 718 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 490 - -
Mepo1g04032 718 MobiDBLite consensus disorder prediction 237 285 - -
Mepo1g04032 718 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Mepo1g04032 718 ProSiteProfiles Protein kinase domain profile. 413 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04032 718 MobiDBLite consensus disorder prediction 696 710 - -
Mepo1g04032 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 254 - -
Mepo1g04032 718 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 690 IPR046959 -
Mepo1g04032 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 491 699 - -
Mepo1g04032 718 MobiDBLite consensus disorder prediction 260 283 - -
Mepo1g04032 718 SUPERFAMILY L domain-like 29 233 - -
Mepo1g04032 718 Gene3D Transferase(Phosphotransferase) domain 1 492 706 - -
Mepo1g04032 718 CDD STKc_IRAK 419 688 - -
Mepo1g04032 718 Gene3D Ribonuclease Inhibitor 28 253 IPR032675 -
Mepo1g04032 718 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Mepo1g04032 718 Gene3D Phosphorylase Kinase; domain 1 377 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04032 Mepo-Chr1 46852872 46860025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04032 7 710 Strubbelig Receptor Gene Family AT1G53730 65.260 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo1g04032 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04032 - - gmx:100780323 1082.01