Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04024 ATGAGATCAACATCAAACCAACCCTCCAACCCTTCTTCCAAAAACTACATATTTTTCTCCAAACTAATGTCCTCTTTCAAAAAAACAACCTTTTTTCTAACCTTATTCATTGTCCATGTCTCTTCTTCTTGTAACCAACTTGACAAAGATTCTCTCTTATCTTTCTCTTCAAATTTATCAACTTTTTCACCTCACCTACCACCTCTTAACTGGTCTTCTTCCATTGATTGTTGCAGTTGGGAAGGTATAACTTGTGATCAAAATAATCACCATGTTACACATCTTCTCTTACCTTCTAGAGGACTCACTGGTTTCATTTCATTTTCTCTTTTAACTTCCCTTGAATCTCTTTCTCATCTTAATCTTTCACATAATAGATTTTATGGTAATCTTCAAAATCACTTTTTTGATCTTCTTAATCATCTTTTAGTCCTTGATTTGAGTTATAATCACTTCTCTGGTGAATTACCATCTTTTGTTAAACCTAGCAATGGAACTGGAAATGGAAATAGTAGTGTTATTCAGGAATTGGATTTTTCTAGTAATTCATTCAATGGAACATTACCAGTTTCTCTGATTCAGTATCTTGCAGAAGGAGGGAATTTGATTTCTTTCAATGTAAGTAACAACAGTTTCACAGGTCCAATTCCAATTTCAATTTTTTGTGTTAATGAATTGAACAATTCTGCTATAAGATTCTTGGATTATTCTTCCAATGATTTTAGTGGTACTATTGAGAATGGTTTAGGAGCATGTTCTAAGCTTGAGAGATTTAGGGCTGGTTTCAATGTTCTATCAGGGGATATACCAATTGATATTTATGATGCTGTTTCACTCATTGAAATATCATTGCCACTTAATAAGATTAATGGATCAATTGGTGATGGAGTTGTCAATCTTGTCAATCTCACTGTTTTGGAGCTTTATTCCAATCATTTGATAGGTCCTATTCCTAGGGATATTGGTAGACTTTCCAAGCTGGAAAAGTTGCTTCTTCATGTCAATAATTTGACCGGTACGATTCCACCATCTTTGATGAATTGTAACAATCTTGTTGTGTTGAATTTGAGGGTGAATAATTTGGAAGGGAATCTTTCAGCGTTCAATTTCTCGGGATTCGGAAGACTTGTTACGCTTGATCTTGGTAACAATAGGTTTAGCGGTGTTTTACCGCCGACCCTTTATGATTGTAAGTCACTTGCAGCATTAAGGCTTGCAACTAATCAACTTGAGGGACAGGTTTCATCTGAGATACTTGGACTCGAGTCTCTTTCGTTTTTATCGATTTCTAATAACAAGTTGAAGAATATCACCGGTGCTCTTAGGATACTCACTGGTCTCAAGAAGCTTAGTACACTTATGCTCTCCAAGAATTTTTACAATGAAATGATACCACATGGTGTGAACATCATAGATCCTGATGGATTCCAAAATATCCAAGTTTTAGGGTTAGGCGGTTGTAACTTCACCGGTCAGATACCAAGTTGGCTTGAAAATTTAAAGAAGCTTGAGGCCGTAGACCTGTCCTTTAATCAATTCAGTGGTTCAATTCCTTCCTGGTTAGGTACACTTCCTCAGCTTTTCTACATAGACCTGTCTGTTAACCTACTTACTGGTCTGTTTCCGATTGAGCTCACAAAACTCCCTGCACTAGCATCGCAACAAGCAAATGATAAAGTTGAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCCAACAATGTTTCTTTGTTGCAATACAATCAACTTTCAAGCCTTCCACCAGCAATTTATCTCGGAACCAATCACCTCAGTGGCAGCATCCCGATTGAGATTGGCCAACTGAAAGCTCTTCTTCAGCTGGACCTGAAGAAAAACAACTTCTCCGGCAATATACCCGATCAAATTTCAAACTTGGTTAACTTAGAGAAACTAGACCTCTCGGGAAACAACCTATCCGGTGAAATTCCCGTTTCACTCACTAGATTACATTTCTTGTCCTTTTTCAGTGTAGCACACAATAATCTTCAAGGACAGATACCAACTGGTGGTCAGTTTAATACTTTTTCCAACACTAGCTTTGAAGGAAACTTGCAATTGTGCGGTTTGGCTATTCAGCACCCTTGTTCTTCTCAACAAAATACTACTAGAACTTCAGTTAGTAGCAAACCCAGCAAAAAAATAATAGTAATACTTATTATCGCTGTCTCTTTCGGCATAGCTACCCTGATAACATTATTGACACTGTGGATACTCTCCAAGAGAAGGGTTAATCCCAGAGGAGATTCTGATAAGATTGAACTGGAATCAATTTCTCCATACTCAAACAGCGGCGTTCATCCTGAGGTTGATAAGGAGGCTAGCCTGGTGGTATTGTTTCCAAACAAAAATAATGAAACCAAGGATCTTTCCATATTAGAGATCATAAAAGCCACTGAACATTTCAGTCAGGCAAATATAATAGGATGTGGCGGTTTCGGTTTGGTTTATAAAGCATCATTTCAAAATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGCCTTATGGAAAGGGAATTTAAAGCAGAAGTAGAGGCTTTGTCAACAGCACAACACGAGAATCTGGTATCATTGCAAGGCTACTGCGTACATGATGGTTATCGGCTACTCATATATAATTACATGGAGAATGGAAGTCTTGATTACTGGCTGCATGAAAAGTCTGACGGTGCATCTCAACTCGATTGGCCGACTCGTTTGAAGATCGCACAAGGAGCAGGTTGTGGTTTGGCCTATTTGCATATGATTTGTGATCCGCATATCGTGCACCGCGATATAAAGTCAAGCAATATACTCCTCAATGATAAGTTTGAGGCGCGTGTTGCTGATTTCGGGTTGTCGCGGTTGATTCTTCCGTATCAGACTCATGTTACAACGGAACTTGTAGGTACATTAGGTTACATTCCTCCAGAGTATGGGCAAGCATGGGTGGCTACTCTTAGAGGAGATGTGTACAGCTTTGGTGTTGTAATGCTTGAGCTTCTCACTGGAAGGAGACCTATGGATGTATGCAAGCCTAAAATTTCAAGGGAGTTGGTCAGTTGGGTTCAACAGATGAAAAACGAAGGAAAACAAGAACAAGTATTCGACTCAAATCTACGAGGGAAGGGATTTGAAGGAGAGATGCTGCAGGTACTTGATATAGCATGCATGTGTGTTAATATGAATCCTTTCAAGAGACCAACCATCAGAGAAGTTGTTGAATGGCTAAAGAATGTTCCCAGAAATAAAGACTAG 3267 0.3857 MRSTSNQPSNPSSKNYIFFSKLMSSFKKTTFFLTLFIVHVSSSCNQLDKDSLLSFSSNLSTFSPHLPPLNWSSSIDCCSWEGITCDQNNHHVTHLLLPSRGLTGFISFSLLTSLESLSHLNLSHNRFYGNLQNHFFDLLNHLLVLDLSYNHFSGELPSFVKPSNGTGNGNSSVIQELDFSSNSFNGTLPVSLIQYLAEGGNLISFNVSNNSFTGPIPISIFCVNELNNSAIRFLDYSSNDFSGTIENGLGACSKLERFRAGFNVLSGDIPIDIYDAVSLIEISLPLNKINGSIGDGVVNLVNLTVLELYSNHLIGPIPRDIGRLSKLEKLLLHVNNLTGTIPPSLMNCNNLVVLNLRVNNLEGNLSAFNFSGFGRLVTLDLGNNRFSGVLPPTLYDCKSLAALRLATNQLEGQVSSEILGLESLSFLSISNNKLKNITGALRILTGLKKLSTLMLSKNFYNEMIPHGVNIIDPDGFQNIQVLGLGGCNFTGQIPSWLENLKKLEAVDLSFNQFSGSIPSWLGTLPQLFYIDLSVNLLTGLFPIELTKLPALASQQANDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGTNHLSGSIPIEIGQLKALLQLDLKKNNFSGNIPDQISNLVNLEKLDLSGNNLSGEIPVSLTRLHFLSFFSVAHNNLQGQIPTGGQFNTFSNTSFEGNLQLCGLAIQHPCSSQQNTTRTSVSSKPSKKIIVILIIAVSFGIATLITLLTLWILSKRRVNPRGDSDKIELESISPYSNSGVHPEVDKEASLVVLFPNKNNETKDLSILEIIKATEHFSQANIIGCGGFGLVYKASFQNGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVSLQGYCVHDGYRLLIYNYMENGSLDYWLHEKSDGASQLDWPTRLKIAQGAGCGLAYLHMICDPHIVHRDIKSSNILLNDKFEARVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPMDVCKPKISRELVSWVQQMKNEGKQEQVFDSNLRGKGFEGEMLQVLDIACMCVNMNPFKRPTIREVVEWLKNVPRNKD 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04024 1088 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 365 - -
Mepo1g04024 1088 FunFam Leucine-rich repeat receptor-like protein kinase 885 1088 - -
Mepo1g04024 1088 SUPERFAMILY L domain-like 71 292 - -
Mepo1g04024 1088 SMART LRR_typ_2 500 524 IPR003591 -
Mepo1g04024 1088 SMART LRR_typ_2 114 138 IPR003591 -
Mepo1g04024 1088 SMART LRR_typ_2 373 397 IPR003591 -
Mepo1g04024 1088 SMART LRR_typ_2 633 657 IPR003591 -
Mepo1g04024 1088 SMART LRR_typ_2 300 324 IPR003591 -
Mepo1g04024 1088 SMART LRR_typ_2 139 162 IPR003591 -
Mepo1g04024 1088 SMART LRR_typ_2 421 443 IPR003591 -
Mepo1g04024 1088 Gene3D Transferase(Phosphotransferase) domain 1 885 1088 - -
Mepo1g04024 1088 SUPERFAMILY L domain-like 476 697 - -
Mepo1g04024 1088 Gene3D Ribonuclease Inhibitor 167 274 IPR032675 -
Mepo1g04024 1088 FunFam Tyrosine-sulfated glycopeptide receptor 1 370 708 - -
Mepo1g04024 1088 SUPERFAMILY Protein kinase-like (PK-like) 795 1080 IPR011009 -
Mepo1g04024 1088 Pfam Leucine Rich Repeat 635 654 IPR001611 GO:0005515
Mepo1g04024 1088 Gene3D Ribonuclease Inhibitor 275 368 IPR032675 -
Mepo1g04024 1088 Gene3D Phosphorylase Kinase; domain 1 773 884 - -
Mepo1g04024 1088 Gene3D Ribonuclease Inhibitor 369 712 IPR032675 -
Mepo1g04024 1088 SUPERFAMILY L domain-like 225 553 - -
Mepo1g04024 1088 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 443 1081 - -
Mepo1g04024 1088 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Mepo1g04024 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
Mepo1g04024 1088 ProSitePatterns Protein kinases ATP-binding region signature. 815 838 IPR017441 GO:0005524
Mepo1g04024 1088 Gene3D Ribonuclease Inhibitor 47 166 IPR032675 -
Mepo1g04024 1088 Pfam Protein tyrosine and serine/threonine kinase 812 1079 IPR001245 GO:0004672|GO:0006468
Mepo1g04024 1088 SMART serkin_6 809 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04024 1088 ProSiteProfiles Protein kinase domain profile. 809 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04024 1088 ProSiteProfiles Leucine-rich repeat profile. 635 658 IPR001611 GO:0005515
Mepo1g04024 1088 Pfam Leucine rich repeat 478 537 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04024 Mepo-Chr1 46772571 46776185 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04024 31 703 Miscellaneous Gene Families AT1G17240 53.037 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo1g04024 PK_Tyr_Ser-Thr 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04024 - - gmx:100781943 1595.87