Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04018 ATGGCTTCTGCTTGTGCTTCTTCTGCCATTGCAGCTGTTGCCATCTCTGCAAGTTCTCAGAAGAATGGATCACCCATGGGAACCTCAAAAGCTTTTCTTGGAAGGAAACTGAAGGTGAACAGCAACATTGCAGCACCAGTTAGAGTGAGATCTACCACAACAGTGTGTGCAGCAGCTGAGCCTGATAGACCTTTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGATTTTGGATTTGATCCTCTTGGACTTTCATCTGATCCAGAGAGTCTGAAATGGAATGTTCAAGCAGAGCTTGTGCACTGCAGATGGGCAATGTTGGGAGCAGCAGGGATTTTCATCCCAGAATTCCTAACAAAGATTGGTATCTTGAACACACCTTCATGGTACACTGCTGGAGAGCAAGAGTATTTCACAGACACCACCACACTCTTCATAGTTGAGCTCATTTTCATCGGTTGGGCCGAGGGTAGAAGATGGGCTGACATCCTCAATCCAGGTTGTGTCAACACTGACCCTATATTTCCAAACAACAAGCTCACAGGAACTGATGTAGGATACCCTGGTGGACTTTGGTTTGATCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAGCTTAAGGAGTTGAGAACAAAGGAAATTAAGAATGGGAGATTGGCTATGTTGGCTGTGATGGGAGCTTGGTTCCAGCACATTTACACCGGCACTGGTCCTATTGATAACCTCTTTGCTCACCTTGCTGATCCTGGTCATGCTACTATTTTCGCTGTAAGTTCCATCAACACCTCCTAG 813 0.4723 MASACASSAIAAVAISASSQKNGSPMGTSKAFLGRKLKVNSNIAAPVRVRSTTTVCAAAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSSINTS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04018 270 FunFam Chlorophyll a-b binding protein, chloroplastic 73 258 - -
Mepo1g04018 270 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Mepo1g04018 270 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Mepo1g04018 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 264 IPR001344 GO:0009765|GO:0016020
Mepo1g04018 270 SUPERFAMILY Chlorophyll a-b binding protein 61 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04018 Mepo-Chr1 46719152 46721945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04018 46 263 Chloroplast and Mitochondria Gene Families AT3G61470 89.954 5.89e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04018 K08908 - gmx:100802138 485.337