Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04014 ATGACAACCTTATTTCCTCCGACTCTTGACTATGTTCCTGTTGGATTCAGATTCCGACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTACTTGGTAATGATTCCATCGTCAACAATGTTATAGCTGAAGTTGATGTATGCAAGTATGAACCTTGGGACTTACCAGCTTGTTCGGTTGTAAAATCAGATGACCCAGAATGGTTTTTCTTGTGTCCTATTGAATACAAGTATGCAAAGAGTAAAAGGTTTAAAAGGACAACAAAAAATGGTTTTTGGAAAGCTACTGGAAAGGACCGGATGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAGACACTTGTTTACTATAATGGTCGTTTTCCTGGTGTTAAAAGCAGCTGGGTGATTCATGAGTATCATGATACCACCTTTGAAGATAACCAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAAAGGAAGCTGATACAGATATATGTGATGAAGGGGAGCCAAGTAGACGCATGAGTTCCGATGATGAAAATCGAGAAATTTTTGAAGGAATTCCTGATGTGAGTGATACTTTGGCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTCCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCACTTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAAAGTCTGTTTGAAACTATTGAAGAGGAAGATAAGTTCGTCAATTCAATGATTATTGACGGGGATTTGGACAACGGTCATGTCCAATCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTACGCCGTGTGGCGATATTCTTGATACTTCAACGACATTTCTTGAACATCCTAGTTCAGGCGAATACTATGCATCAAAATTGTTGAAATCAATGCATGGTAATGTTCATGGAAGCACCTGTTTTCTATCTTTTAACAATGGTGAAATCGAAGACAACAATGAGAGTACCTTCCGAGATGATTTTGGGGGATTAGAGGCATCCTCTTGTGATTCAACTGCAGATATACCTTTGGAGATGATTAATTGTATTGAAATTTCTAGTTCACCTTCCACTCTAAGAAAACGCAAAAACCAGTATCATCCAAGACCAGCCATCTTCATGTCAAAAAGAGCTGCTTCAAGACGATCTTGA 1242 0.3849 MTTLFPPTLDYVPVGFRFRPTDEELVNHYLKNKLLGNDSIVNNVIAEVDVCKYEPWDLPACSVVKSDDPEWFFLCPIEYKYAKSKRFKRTTKNGFWKATGKDRMIKVRGSNNIIGIKKTLVYYNGRFPGVKSSWVIHEYHDTTFEDNQRTFVLCRLMKKAEKKAEKEADTDICDEGEPSRRMSSDDENREIFEGIPDVSDTLAEINMESIFQAQAEKYLPSISENEQEVSIPNSPLHDAYFRNDNIIVQSLFETIEEEDKFVNSMIIDGDLDNGHVQSESLKMVYYGSSDTDAEVVSTPCGDILDTSTTFLEHPSSGEYYASKLLKSMHGNVHGSTCFLSFNNGEIEDNNESTFRDDFGGLEASSCDSTADIPLEMINCIEISSSPSTLRKRKNQYHPRPAIFMSKRAASRRS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04014 413 Gene3D NAC domain 21 164 IPR036093 GO:0003677|GO:0006355
Mepo1g04014 413 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Mepo1g04014 413 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
Mepo1g04014 413 MobiDBLite consensus disorder prediction 167 186 - -
Mepo1g04014 413 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Mepo1g04014 413 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04014 Mepo-Chr1 46691117 46693588 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04014 8 163 NAC Transcription Factor Family AT4G35580 53.086 5.30e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g04014 NAM 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04014 - - psat:127076164 498.434