Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04011 ATGGAGACCTCAACTTCAATGCCTATAGGTTATAGATTCAGACCAACAGATCAAGAACTTGTGAGTCACTACCTAAATCACAAGTTGCTTGGTGATGATTCTATTGTCAACAGCATAATAGCTCATGTTCATCTTTTAAACTATGCACCATGGGATTTACCGGAATCTCCAATCTCATCATCAACACTGCCGTTCATCATCATCATCGTACCGGAATGCCAAAACCATTTTGCTGTGGAAATGGTTTCTATGTACTTAATGGTTTCCAGTAGTTGTACTCCAAAACCATTAGATGTATTTAATGGTTTCCAGCAGTTTCCGTGCAGTTATGGTGAAAATCACGAACCCGAATCCACAGTTCCACCTCCAAACCCAGAACCATCACAACCCACTTCAGAACTCCCCAAGAACACGAAGAAGAAGCTAGCGAGACAACAAAGATGGGAAGCAAAGAAAGCAGAGAAGAAAGCGGCGTCGAAGGAGCAGAAGAAGAAGGAAACCGAACGGAAATGA 513 0.423 METSTSMPIGYRFRPTDQELVSHYLNHKLLGDDSIVNSIIAHVHLLNYAPWDLPESPISSSTLPFIIIIVPECQNHFAVEMVSMYLMVSSSCTPKPLDVFNGFQQFPCSYGENHEPESTVPPPNPEPSQPTSELPKNTKKKLARQQRWEAKKAEKKAASKEQKKKETERK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04011 170 MobiDBLite consensus disorder prediction 137 170 - -
Mepo1g04011 170 ProSiteProfiles NAC domain profile. 7 170 IPR003441 GO:0003677|GO:0006355
Mepo1g04011 170 PANTHER NAC TRANSCRIPTION FACTOR 56 7 54 - -
Mepo1g04011 170 Gene3D NAC domain 16 102 IPR036093 GO:0003677|GO:0006355
Mepo1g04011 170 SUPERFAMILY NAC domain 5 66 IPR036093 GO:0003677|GO:0006355
Mepo1g04011 170 Coils Coil 143 170 - -
Mepo1g04011 170 Pfam No apical meristem (NAM) protein 8 56 IPR003441 GO:0003677|GO:0006355
Mepo1g04011 170 MobiDBLite consensus disorder prediction 111 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04011 Mepo-Chr1 46680275 46681389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04011 6 71 NAC Transcription Factor Family AT4G35580 40.909 4.74e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g04011 NAM 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04011 - - mtr:25500586 96.6709