Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04010 ATGACAACCTCATCTTCTCTCATTCTTGATTCTCTTCCTCTTGGATTCAGGTTCCGACCAACAAATGAAGAGCTAGTTAATCACTACCTCAAGAACAAGTTACTTGGTAATACCAATGATTCCGTTGTTAACAATGTCATGGCTGAAGTTGATGTTTGTAAGTTTGAGCCTTGGGAGTTACCATCTTATTCGGTGATAAAATCCGATGACCCAGAATGGTTTTTCTTGTGTCGTCGTAATTACAAGTATGCAAACTGTAGAAAGATTAACCGAGAAACGAAGTTAGGATTTTGGAAAGCTACTGGGAATGATATTAAGATTAATGGGAGTGACAAAGTTATTGCAACTAAGAAGATTCTTGTTTACTATCAGAAAGCCACTGGGAGTGAACGTGCTGTTAAGACCAATTGGGTTATACATGAGTATCATGATTCTGTCACCTTTGATGATGATAAGCAGAGGACTCATTACTTATGTCACTTGATTAAAAATGCCGAGAAAAAAGGTGAAGATGAAAATTATACAATGTTATGTGATGAAGGGGAGTCCTCCACCAGACGATTGACAACCTCTTTTCTTCCAACTCTTCCCCTTGTTCCGGTTGGACTCAGATTCTGTCCAACAGATGAAGAGCTTGTTAAGCACTACCTTAAAAATAAGATACTTCGTAATGATTCCATTGCAAACAATGTTATTGCTGAAATTGATGTATGCAAGTTCGAACCTTGTGACTTACCAGCTCGTTCCTTGATAAAATCGGATGACCCAGAATGGTTTTTCTTGTGTCCTCTTCAATACAAGTATGAAAAGAGTAAAAGGATCAATAGGACAACAAAAAATGGTTTCTGGAAAGCTACTGGAAGGGATCGTAACATTAAGATTAGGGGTACCAATAAAGTTATTGGGAGTAAGAAGATTCTTGTCTACCATGAAGGTCTCGCTCCTGGTGTTAACACCAATTGGATCATTCATGAGTATCATGATGCCACCTTTGATGATTCCCAGAGGACTTTTGTTTTATGCCGCTTGATGAAAAAAGCTGTGAAAAATACTGAAGAGGAACCGGATACAATGATATGTGGCGAAGGGGAGTCGAGCAGACACATGAGTTCTAACTACGAAAATCAAGAAACAACCGAAGGAATTTCAAATGTAATAAGTGGTACTCTGCCAGAAATAAATATGGAATTTGAGGAACCATACCAAGCAGACAATGACTTTCCCTTCTCTACTCAACAATCTTCAATCTATGAAAATGAGCCAGAAGTATACTTCTCAAACTCACAATCTCAAGGTGCTTATTATAAGTATGGAGACATTGCTATTCGGAGTCCTTTGGAAATCATTGAAGAGGAAAGTAACTTTCTTAATTCACTGTTTAATGATGGAGATTTTGTTACTCGTCATAAGAATGGTCTACTATGA 1425 0.3782 MTTSSSLILDSLPLGFRFRPTNEELVNHYLKNKLLGNTNDSVVNNVMAEVDVCKFEPWELPSYSVIKSDDPEWFFLCRRNYKYANCRKINRETKLGFWKATGNDIKINGSDKVIATKKILVYYQKATGSERAVKTNWVIHEYHDSVTFDDDKQRTHYLCHLIKNAEKKGEDENYTMLCDEGESSTRRLTTSFLPTLPLVPVGLRFCPTDEELVKHYLKNKILRNDSIANNVIAEIDVCKFEPCDLPARSLIKSDDPEWFFLCPLQYKYEKSKRINRTTKNGFWKATGRDRNIKIRGTNKVIGSKKILVYHEGLAPGVNTNWIIHEYHDATFDDSQRTFVLCRLMKKAVKNTEEEPDTMICGEGESSRHMSSNYENQETTEGISNVISGTLPEINMEFEEPYQADNDFPFSTQQSSIYENEPEVYFSNSQSQGAYYKYGDIAIRSPLEIIEEESNFLNSLFNDGDFVTRHKNGLL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04010 474 Pfam No apical meristem (NAM) protein 200 327 IPR003441 GO:0003677|GO:0006355
Mepo1g04010 474 Pfam No apical meristem (NAM) protein 13 143 IPR003441 GO:0003677|GO:0006355
Mepo1g04010 474 MobiDBLite consensus disorder prediction 354 378 - -
Mepo1g04010 474 ProSiteProfiles NAC domain profile. 199 346 IPR003441 GO:0003677|GO:0006355
Mepo1g04010 474 Gene3D NAC domain 208 350 IPR036093 GO:0003677|GO:0006355
Mepo1g04010 474 Gene3D NAC domain 21 171 IPR036093 GO:0003677|GO:0006355
Mepo1g04010 474 SUPERFAMILY NAC domain 190 346 IPR036093 GO:0003677|GO:0006355
Mepo1g04010 474 MobiDBLite consensus disorder prediction 364 378 - -
Mepo1g04010 474 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
Mepo1g04010 474 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 199 365 - -
Mepo1g04010 474 ProSiteProfiles NAC domain profile. 12 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04010 Mepo-Chr1 46674511 46677960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04010 199 346 NAC Transcription Factor Family AT3G49530 54.194 5.26e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g04010 NAM 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04010 - - mtr:25500588 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04010 1 46674511 46677960 Mepo1g04010 1 46674511 46677960 ECH