Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04005 ATGGGTAAGGAAAAGGTTCGTATTAACATTGTGGTTATTGGTCATGCCAGCTCTGGGAAGTCAACCACTACTGCTCATTTGCTCTACAACCTCGGAGGCATTGAAAACAATGTCATTGAGAGTCTTGAGAAAGAACCTCCTTCAGTCAAGTATGCTTGGGTGCTTGACAAACTCAAGGATGACCATGCAAAAGGTGCCACAATTGACATGTCCAAGTTTGAGACAGACAAGTACAGCTGCACTGTCATTGATGCCCCCGGACAGAGCATTAAGAACATAACGACTGGAGCGTCCCTAGCTAACTGTGCTGTTCTCGTCATTGATTCCAATACTACTACGATTGGTCAGACCCTTGAACATGCTCTTCTTGCCTTCAATCTTGATGTGGATCAAATTATCTGCTGCTGCAACAAGATGGATGCCACTACACCCAAATACTCCATGGTTAGGTATTCAGAAATATCGGACCAAGTTTTATCCTATTTGGTCAAGGTTGGCTATAACTCACGTGAAATTTCATTTATTCCCATCTCTAGTTTGGATGGAGATAACTTGATTAAGCGCTCCACTAATTTTGACTGGTACAGTGGTCCCACCCTTCTTGAAGCTATTGACAATATGAAAGAGCCTGAGAGGCCATCAGATTTGGCTCTCCGACTATCAATTCAGGATTTCTACAATATCGGAGGAATCAGAGATTTCCTTGTGGGACGTGTCGAGACTGGTTGCTTGCACCCTAGAATGTCTGTGACTTTTGCCCCAACTGGGCTGGAAGCTGAAGTCGAATCTGTGGAGTTGTACCCTGGAACTAGGCTGCAAGCTGACGTAAACTCTTCGGAGATGCACCGTGAACCTCTCAATGTGGCCTATCCTGGTGACATTGTGAGATTTAATGTCAACGTTTCTGCTACGGATCTCAAGCAAGGCTATGTTGCCTCAAACCTCAAGGATGACCCAGCCATGGAGGCCGAATACTTTACATCTCATGTTATCATCACAAATCACCCTAACCAGATTGAAAAAGGCTATACGCCTATTCTTCACTGCCACACCTCCCACATTCATGTCAAATTTGCTGAGCTTATTTGCAAGGTTGACAATCGTTCTAGAAAGCTAATTGAGAAAGGCCCACCATTCTTGAAAAATGGTGACGCTTGTATTATTAAGATGATTCCCACCAAGCCTTTGGTGGTAGAGCCTTTCTCTCTATATCCTCCACTCAGCCGTTTTGTTATCGAAGACTTGGATCAAATTGTGGCTGTTGGTGTTGTCATCAATGTGACGAGCAAGATTACTAAGAATTGA 1305 0.4398 MGKEKVRINIVVIGHASSGKSTTTAHLLYNLGGIENNVIESLEKEPPSVKYAWVLDKLKDDHAKGATIDMSKFETDKYSCTVIDAPGQSIKNITTGASLANCAVLVIDSNTTTIGQTLEHALLAFNLDVDQIICCCNKMDATTPKYSMVRYSEISDQVLSYLVKVGYNSREISFIPISSLDGDNLIKRSTNFDWYSGPTLLEAIDNMKEPERPSDLALRLSIQDFYNIGGIRDFLVGRVETGCLHPRMSVTFAPTGLEAEVESVELYPGTRLQADVNSSEMHREPLNVAYPGDIVRFNVNVSATDLKQGYVASNLKDDPAMEAEYFTSHVIITNHPNQIEKGYTPILHCHTSHIHVKFAELICKVDNRSRKLIEKGPPFLKNGDACIIKMIPTKPLVVEPFSLYPPLSRFVIEDLDQIVAVGVVINVTSKITKN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04005 434 Pfam Elongation factor Tu GTP binding domain 8 206 IPR000795 GO:0003924|GO:0005525
Mepo1g04005 434 PRINTS GTP-binding elongation factor signature 63 71 IPR000795 GO:0003924|GO:0005525
Mepo1g04005 434 PRINTS GTP-binding elongation factor signature 95 106 IPR000795 GO:0003924|GO:0005525
Mepo1g04005 434 PRINTS GTP-binding elongation factor signature 132 141 IPR000795 GO:0003924|GO:0005525
Mepo1g04005 434 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo1g04005 434 Gene3D - 1 212 IPR027417 -
Mepo1g04005 434 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 324 427 IPR009001 -
Mepo1g04005 434 CDD EF1_alpha_III 321 424 - -
Mepo1g04005 434 Gene3D Translation factors 213 321 - -
Mepo1g04005 434 Gene3D Translation factors 322 428 - -
Mepo1g04005 434 Pfam Elongation factor Tu C-terminal domain 321 427 IPR004160 -
Mepo1g04005 434 SUPERFAMILY Translation proteins 218 320 IPR009000 -
Mepo1g04005 434 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 214 IPR000795 GO:0003924|GO:0005525
Mepo1g04005 434 PANTHER TRANSLATION FACTOR 4 429 - -
Mepo1g04005 434 FunFam Elongation factor 1-alpha 321 428 - -
Mepo1g04005 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 230 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04005 Mepo-Chr1 46634804 46636196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04005 1 430 Eukaryotic Initiation Factors Gene Family AT5G60390 61.745 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04005 K03231 - apan:127253780 522.316