Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04000 ATGGATTTGGTGGGACCCACCATGACAAGATTGGTCGGGGATTACATACTGGGTCCTCGTATCGGGTCAGGTTCATTTGCAGTGGTGTGGCGTTCACGTCATCGAAATTCAGGTTTGGAGGTAGCAATTAAGGAAATTGATAAGACCCAATTGAGTTCTAAAGTTAAAGATAATCTCATCAAAGAAATTTTTATTCTTAGTACTATTCATCATCCTAATATCATTCAACTCTTTGAAGCTATTCAGACAAATGATAGGATTTATCTTGTTTTGGAGTATTGTGGTGGAGGTGATCTTTCTGCTTATATTCAGCGATATGGGAGAGTTTCTGAATCTGTTGCTAGACATTTCATGAGGCAACTGGCTGCCGGTTTGCAGGTGCTTCAAGAAAAGAACCTCATACATAGAGATTTAAAACCACAGAATTTACTGTTGGCAACTACTTCAGCTACACCACTTATGAAAATAGGAGATTTTGGTTTTGCACGGTCTCTCACACCTCTGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCTCCGGAGATAATTCAGAGTCAGAAGTATGACGCTAAGGCTGATTTGTGGAGTGTTGGTGCAATATTGTATCAGCTAGTTGTTGGGAAACCTCCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATATTGGCATCTACTGAACTGCACTTTCCACCAACAATTTTAAAAGAGCTGCATTCTGATTGTGTGGACCTTTGCAGAAGCCTTTTACGTCAAGATCCAGATGAGAGATTAACATTCAAGGCGTTCTTCAGTCACAACTTCCTACAGGAACACAGGTCCAACGTGAATATCGAGCAGTTTCATTCACATCAATCAGAAAGCTCGATGGTTAATCAATTAGTTGGCTCTGCCTTTGAGGTGTCTCAAGCATGTTCTGAGCATCATGTTGAGTCATTTGTAGATGATCCTGTGGCAGTCAGTTCAGCGGTCAATGAAACCATGTTTTTGCAAAGAAAGGGTGGCAAGAGTACAACTGACACCCAGAGTGCTAAAGGGTCGAATCCAACTAATGCACACGATAAGCCGGGGAAGTCCATTGATACTGCAAACCAAGCTCGAGTTTCACATTTAATGGAGTCCATTGAGAAAGGCTATGTCCTCATCAATCCTCATTTTACATCATTGGAGGATTTCTCTGACTACTTTGAGGCATCTGTGCAAGATAATCCCTCAAGTGGCGTTTCAATCTGTCCTTTAAAGGGGACTAACCTGGAGATTGGAAAGCAAACTAAGGATCCGTCGTCTTCTTCAACTGATGGGTTAGACAATTTTAAAAGCGATGAACTTGAGACATTTGTAGCATCCTGTGAATTTTCAACGTTAAGGAAAGAGCAGGAATTTTCTTTACAGCACCCTTCAAACAGGTTAGAGTTGTTGGATCAGTATGTGCAAGTCCTTGGTGAACTTTCGCAAGAAAAGTATAACACGGGATTATATCTAGAATCGCTTGCAGTTGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTTTAGACATCTGTAGCACTTGGTCAGTCCCCATATCCGAGGGTGAGTTGAATAGAAGCAGTTCAATTAATGAGTCCATAATTGCTGGTGGAGACGCGAGCTTATCACAGACTGTGGAACAGAAAATAAATTTTAGTGACCATTCTTCCGTCTCTTTGTGGGCCAAACATGGATTTGTCATTGCAGTTGATCGTGCTGAGAAACTATCATGTCATATTCAAAACATGGATGGTGCAGTTGAGATGCCAGATGCAATGGAGATTATATTCCAGCAAGCACTCCTTGTTGGGACAAATGCTGCTGTAGATGAGTATATGAATAACAAAGATAAGTCTGCTGCATCTTACTCAAATGCGATGCTTCTGCTTTCATTTATTGTGGGAGAAGCACAGAACCTTCCACTGAATCCTCCATTTTCACTTCTTGCTGATGATCAGAAGCGAATCGTGCAATATATTCGCAACTTGCAGTTTCACAAAAAATCTCTGTCAGAGTCCGTTTCAAAGGAATCCCATACTCTTTCGTGA 2067 0.4107 MDLVGPTMTRLVGDYILGPRIGSGSFAVVWRSRHRNSGLEVAIKEIDKTQLSSKVKDNLIKEIFILSTIHHPNIIQLFEAIQTNDRIYLVLEYCGGGDLSAYIQRYGRVSESVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELHFPPTILKELHSDCVDLCRSLLRQDPDERLTFKAFFSHNFLQEHRSNVNIEQFHSHQSESSMVNQLVGSAFEVSQACSEHHVESFVDDPVAVSSAVNETMFLQRKGGKSTTDTQSAKGSNPTNAHDKPGKSIDTANQARVSHLMESIEKGYVLINPHFTSLEDFSDYFEASVQDNPSSGVSICPLKGTNLEIGKQTKDPSSSSTDGLDNFKSDELETFVASCEFSTLRKEQEFSLQHPSNRLELLDQYVQVLGELSQEKYNTGLYLESLAVELVVLAIWKKALDICSTWSVPISEGELNRSSSINESIIAGGDASLSQTVEQKINFSDHSSVSLWAKHGFVIAVDRAEKLSCHIQNMDGAVEMPDAMEIIFQQALLVGTNAAVDEYMNNKDKSAASYSNAMLLLSFIVGEAQNLPLNPPFSLLADDQKRIVQYIRNLQFHKKSLSESVSKESHTLS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04000 688 CDD STKc_ATG1_ULK_like 21 272 - -
Mepo1g04000 688 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04000 688 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 605 IPR045269 GO:0004674|GO:0006914
Mepo1g04000 688 FunFam Non-specific serine/threonine protein kinase 4 95 - -
Mepo1g04000 688 SUPERFAMILY Protein kinase-like (PK-like) 11 317 IPR011009 -
Mepo1g04000 688 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Mepo1g04000 688 Gene3D Transferase(Phosphotransferase) domain 1 7 357 - -
Mepo1g04000 688 MobiDBLite consensus disorder prediction 335 364 - -
Mepo1g04000 688 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04000 688 FunFam Serine/threonine-protein kinase ATG1 7 316 - -
Mepo1g04000 688 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04000 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04000 Mepo-Chr1 46547805 46554003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04000 7 345 CBL-interacting serine-threonine protein kinases AT4G14580 34.659 1.39e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mepo1g04000 Pkinase 4.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04000 - K08269 tpra:123884297 1094.34