Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03996 ATGGACACAAATGCAGGAGATTCTGCCAAGCAATTAAGGGGTGAACAAATGACAGCTAACCACCTCACACAAGATGGCCAAAATGAAGAAGATGGCATAGTTTTTGCTTTAAACTTGATTTCTTCTATCATGGTTCCACTGGTCGTTCGATCTGCAGTTGAGCTTGGCATCTTTGACATCTTAGCCAAAGCAGGGGAAAATGCCAAGCTCTCTGCAGATGACATAGTCGTTGAGATTAGATCAAAGAACCAAGAAGCACCCACCATGTTGGATCGTCTTCTGAGGTTGTTGGCAAGTCATTCCATGCTCCATTGCTCGCTTTCTGAAGATCAACAAGGGCTTGAGTCTCCTCAAAGGCTTTATAGCCTCAACCCTGCCTCTAAGTATTTTGTGACGGATGTTGATGGTGTGTCATTTGGACCAACATTAAATTTACAACTCGACAAAGTTTTCTTGGGAAGCTGGACCGAAATGAAAGGAGCAATTTTGGAAGGAGGTATACCATTCAATAGGGTTTATGGCATGCATGCATTTGAATACACAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAATGCCATGGTCAATTGCACAACTATAGTCATGAAGAGGGTTCTTGAAATTTATGAAGGTTTTGAGCACATCAATAAACTTGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAAGCTAATTACTTCTAAATATCCTCATATACATGGTGTTAATTTTGACTTGCCTCACGTCCTAGAACATGCACCTACCTATGACGGTGTGACGCATGTAGGAGGAGATATGTTTGAGAGTGTTCCTGATGGAGATGTCATATTTTTGAAGTGGATACTTCATGATTGGAGTGATGAACAATGTCTGAAGTTATTGAAGAATTGTCATAAAGCTATTCCTAATGATGGAAAAGTGATTGTTGTGGACTCAATTCTTCCTATTTTCCCCGAGAGTACAACGGTTGCCAAGATGGCTTTCCAAGCTGACGTCATGATGATGGCTCAAAATCCAGGAGGCAAAGAGAGAACCAAAGATGAGTTCATAAAATTGGCATTACAATCTGGATTTAGTGGCATCAAATATGCCTGCTCTTTCTCTGACTTTTGGGTTATGGAATTCTTTAAGTAG 1137 0.409 MDTNAGDSAKQLRGEQMTANHLTQDGQNEEDGIVFALNLISSIMVPLVVRSAVELGIFDILAKAGENAKLSADDIVVEIRSKNQEAPTMLDRLLRLLASHSMLHCSLSEDQQGLESPQRLYSLNPASKYFVTDVDGVSFGPTLNLQLDKVFLGSWTEMKGAILEGGIPFNRVYGMHAFEYTSVDPRFNDVFNNAMVNCTTIVMKRVLEIYEGFEHINKLVDVGGGLGINLKLITSKYPHIHGVNFDLPHVLEHAPTYDGVTHVGGDMFESVPDGDVIFLKWILHDWSDEQCLKLLKNCHKAIPNDGKVIVVDSILPIFPESTTVAKMAFQADVMMMAQNPGGKERTKDEFIKLALQSGFSGIKYACSFSDFWVMEFFK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03996 378 Gene3D - 15 130 IPR036388 -
Mepo1g03996 378 Pfam O-methyltransferase domain 155 360 IPR001077 GO:0008171
Mepo1g03996 378 Pfam Dimerisation domain 48 98 IPR012967 GO:0046983
Mepo1g03996 378 PANTHER O-METHYLTRANSFERASE 39 363 IPR016461 GO:0008168
Mepo1g03996 378 PIRSF O-mtase 14 378 IPR016461 GO:0008168
Mepo1g03996 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 378 IPR016461 GO:0008168
Mepo1g03996 378 Gene3D Vaccinia Virus protein VP39 132 378 IPR029063 -
Mepo1g03996 378 FunFam Caffeic acid 3-O-methyltransferase 15 130 - -
Mepo1g03996 378 FunFam Caffeic acid O-methyltransferase 131 378 - -
Mepo1g03996 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 375 IPR029063 -
Mepo1g03996 378 SUPERFAMILY "Winged helix" DNA-binding domain 28 133 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03996 Mepo-Chr1 46528249 46537010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03996 16 378 Monolignol Biosynthesis Gene Families AT5G54160 51.093 5.81e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03996 K13066 - gmx:100789402 552.362