Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03994 ATGGAGAGGCTTCAAGGACCCATCAATTCTTGTTTCTTTGGTGAAGTGAATTGTTTAGACCAAACATTACTTGATGAACAGAGTTTGAGATTTGAAGAGGAAGAACAATTTCTCATATCAAGTTTAGAAGATAACATGCCATTTCTTCAAATGCTACAAAGTGTTGATTCTCCACAGTTTTTTCCTTTGAAAGAACAAAACTTTCAAACACTTTTAAGGCTTCAACACATGAAAAAACCATGGGAAGACATATCTTACATTCCTAGAATGGATTCACAACAAGTCCAAACAACATTGGAATTTGAAAGCTGTGTAACACAAGAAATGTTGGAGATGCAATCACCAGTGAAATCAGAAAGCAATGAACTTCAACACAAAGTTTCATGCATTGAGAAATTGAGCTATGAATGTAACCAACAAGAAGAAACAAAAACAGCACAATCATGTTCCAAATCTCAACAAGGAACAACAAGGGAAAAGAGAAAGAGAAAAAGAACAAGACCAGTTAAGAATAAGGAAGATGTTGAGAATCAAAGAATGACACACATTGCTGTTGAACGTAATAGGAGACGCCAAATGAATGACCATCTTAGTGTTCTTAGGTCTCTCATGCCATCTTCATATGTTCAAAGGGGTGACCAAGCATCAATAATTGGAGGAGCAATTGATTTTGTGAAAGAGTTGGAACAATTGCTTGAATCTCTTGAAGCACAAAAAAGGATAAAAAAGAATGAAGATTTTGGTTCCTCATCATCATCACCACCACCTAGTTATGGAATGAAATTATCACCTTGTGAAGAAAATGAGGTAAAGGCAGAAAACAAATCAGAAGCAGCAGATATAAAAGTGACATTGATTCAAACCCATGTGAACTTGAAAATTGAGTGCAAAAAAAAGGCTGGTCAATTGATAAAGGTTATTGTTGCTTTGGAAAATCTTAGGCTAACTATTCTTCACCTAAACATCACATCCTTTGAGTCTTCTGTACTCTACTCCCTCAATCTCAAGATTGAAGAAGACTGTAAGCTAGGCACAGCAAATGACATAGCAGAAGCAGTTCATCAAATATTCAGCTACATCAATAATGGTAGCTAA 1095 0.3562 MERLQGPINSCFFGEVNCLDQTLLDEQSLRFEEEEQFLISSLEDNMPFLQMLQSVDSPQFFPLKEQNFQTLLRLQHMKKPWEDISYIPRMDSQQVQTTLEFESCVTQEMLEMQSPVKSESNELQHKVSCIEKLSYECNQQEETKTAQSCSKSQQGTTREKRKRKRTRPVKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPSSYVQRGDQASIIGGAIDFVKELEQLLESLEAQKRIKKNEDFGSSSSSPPPSYGMKLSPCEENEVKAENKSEAADIKVTLIQTHVNLKIECKKKAGQLIKVIVALENLRLTILHLNITSFESSVLYSLNLKIEEDCKLGTANDIAEAVHQIFSYINNGS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03994 364 PANTHER TRANSCRIPTION FACTOR FAMA 103 357 IPR044283 GO:0003700|GO:0010052
Mepo1g03994 364 Pfam Helix-loop-helix DNA-binding domain 178 229 IPR011598 GO:0046983
Mepo1g03994 364 Gene3D - 168 245 IPR036638 GO:0046983
Mepo1g03994 364 MobiDBLite consensus disorder prediction 141 176 - -
Mepo1g03994 364 SMART finulus 183 234 IPR011598 GO:0046983
Mepo1g03994 364 Coils Coil 225 245 - -
Mepo1g03994 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 228 IPR011598 GO:0046983
Mepo1g03994 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 245 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03994 Mepo-Chr1 46488279 46491714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03994 51 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 39.607 1.66e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g03994 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03994 - - gmx:100789928 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03994 1 46488279 46491714 Mepo1g03994 1 46488279 46491714 ECH