Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03991 ATGAATGAAGAAATTGAATTAAAAAGAAAAATGAATGAAATAGAAGAGAAGAAGAAAGAGGATGGTGTATTTAAATGGGAAATGTTTCTACCAAGAAAAAATGTTACTGTTCTTCTTGTTGAATCTGATCGTGCTACTCGGAGGTTAATTACTTCACTTCTTAATAATTGCCATTACAAAGTTATTGCGGTTTCTAACGGATCAAAGGCATGGGAGACGATGAAGATGAAGGCAATTGATATTGATCTCGTATTAACAGAAATGGAGTTGCCGGCAATATCTGGATTTGCACTTCTTTCGTTAATTATGGAGCATGAAATCGGCAAAAACATTCCCGTTATAATGATGTCTTCTCATGATTCACGTAGCACGGTAATGAAATGCATGTGTAAAGGTGCAGCTGATTTTCTTATCAAACCTGTCCGGAAGAATGAGCTTACGAACTTATGGCAGCATGTCTGGAGAAAGCACGTTATTAACAGGCCTCTCCAAAATGCATCATCTGCACAAAGTAACCTTAAAATTGCCACAGAAGACAATTTTGCTCGCAATCAATTGACTGATTCTGCTTCTGTGGCTTCCTCACAGAAAAATTATGAATGCAGTGAGAAATTGAGCAAGGCTCAAAGCACATGTGCAATGCCATTTTCTGATGCTGAGAATGTATACATGGATAATAAGCAAAAGCCTTGTCAGATGAAGAGTTCTGTGAAATTAAGCAACATTGATGTGTCGAAGCATGCAGAGTCTAACAAAATTGAAAGAGGATCAACTAAGCATACTGATGAAACCGGAGATTCAAGGCTAGAACAAGACTGCGGTACTGCTGAAATTGAACCCAAAAGTGAAATGTTTAGAGCTGAGTCAAGCAGAGAGAACCCTAATATTGATACCGAGATACGTGGATGTAGTGATGAACTGATAGAACCTTCTAGCAGAGCTGTCGACTTGATTTCCACATTTGGGAATCTCCATATGCCCACCAAGGAAATCCATTGTACTAATGGGGATAAAGAAACCAAGTTTGATTTTAAAAAAGAACTGGAGCTTTCTTTAAGAAGTGATTTTTCTGGCAGCTCATGCAAACAAGCAAGTGAAACAACTGAGGAATGGCAAAGATTGAATCACTCAGATGCTTCTGCCTTTTCTCGGTATGTTGGCAGTAAGATGTTGCGGCCACTTCTTCAAAACTCCAATTGGAATTCTAATAAGTCTCACGAAGTATCTGTAGTTACTGCTGGTAATTGTTTTCAGTATGCTGGCTCAATTAAAATGGAAAATATGACCACTGCAGTCATGGCTCAGTATGAACAACTTGGACTCTCAGCTGATAATGTTTTCCATCACATGTTGACTCCTAAATCAAATTGCCAAAAAGAGAGCTCTCCCTTTCCCTCAAGTTCCTCCTCCCAGTCCAATCCTGAAAGTCACAATTCAGAACATCATCATATTTGCTGTTATGATGCTAACTACAGTTTTCATAATCAAAATGTTACTGAAAAAACTGATTTGGATCATACAGTGCATGACTCTCCTAGTGCTGATCAGGGTTTTGGCAATGACTTTTGTCATGCTTCAAATCATATTAATAGTGGTGGCAATGTTGGAAAAGCTATTTCAAATGCGGTTACTAAGAATTCAAGAACTTCTAGTGATGGTAGGCGCTATAATCATAGTAATTATGATTATGATTGTGATGATGATGAAGAATTTAGATTGAGTGATTCTCATCGCTCCAGTCAGAGAGAAGCAGCTCTAACAAAGTTTCGATTAAAACGAAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAAAGCCGAAAAAAACTGGCAGAGCAGCGTCTTCGGGTTAAAGGGCAGTTCGTACGCAAAGTACAAGATGATCACCCAAGTGTAGATGCTAGTAGTGGTGATCAATAA 1920 0.3839 MNEEIELKRKMNEIEEKKKEDGVFKWEMFLPRKNVTVLLVESDRATRRLITSLLNNCHYKVIAVSNGSKAWETMKMKAIDIDLVLTEMELPAISGFALLSLIMEHEIGKNIPVIMMSSHDSRSTVMKCMCKGAADFLIKPVRKNELTNLWQHVWRKHVINRPLQNASSAQSNLKIATEDNFARNQLTDSASVASSQKNYECSEKLSKAQSTCAMPFSDAENVYMDNKQKPCQMKSSVKLSNIDVSKHAESNKIERGSTKHTDETGDSRLEQDCGTAEIEPKSEMFRAESSRENPNIDTEIRGCSDELIEPSSRAVDLISTFGNLHMPTKEIHCTNGDKETKFDFKKELELSLRSDFSGSSCKQASETTEEWQRLNHSDASAFSRYVGSKMLRPLLQNSNWNSNKSHEVSVVTAGNCFQYAGSIKMENMTTAVMAQYEQLGLSADNVFHHMLTPKSNCQKESSPFPSSSSSQSNPESHNSEHHHICCYDANYSFHNQNVTEKTDLDHTVHDSPSADQGFGNDFCHASNHINSGGNVGKAISNAVTKNSRTSSDGRRYNHSNYDYDCDDDEEFRLSDSHRSSQREAALTKFRLKRKERCFEKKVRYQSRKKLAEQRLRVKGQFVRKVQDDHPSVDASSGDQ 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03991 639 SMART REC_2 35 150 IPR001789 GO:0000160
Mepo1g03991 639 Gene3D - 35 257 - -
Mepo1g03991 639 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 365 IPR045279 GO:0009736
Mepo1g03991 639 MobiDBLite consensus disorder prediction 454 475 - -
Mepo1g03991 639 MobiDBLite consensus disorder prediction 246 269 - -
Mepo1g03991 639 ProSiteProfiles CCT domain profile. 582 624 IPR010402 GO:0005515
Mepo1g03991 639 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Mepo1g03991 639 MobiDBLite consensus disorder prediction 454 479 - -
Mepo1g03991 639 Pfam CCT motif 582 624 IPR010402 GO:0005515
Mepo1g03991 639 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Mepo1g03991 639 SUPERFAMILY CheY-like 34 166 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03991 Mepo-Chr1 46458236 46462666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03991 566 626 Response Regulator Gene Family AT5G24470 67.213 6.57e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mepo1g03991 Response_reg 7.7e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03991 K12130 - gmx:100791698 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03991 1 46458236 46462666 Mepo1g03991 1 46458236 46462666 ECH