Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03982 ATGTCTCAACAAAGACAACCTCATATGGTGAGTGGTAACAATCAAGACCAATATAATGACACAACATTTACCAAATTATTTGTTGGAGGGTTAGCTTGGGAAACTCAAAGGGAAACAATGAGAATGTATTTTGAACAATTTGGAGAGATCTTAGAAGCTGTTGTTATCACAGATAAGTATACTGGGAGATCTAAAGGTTATGGTTTTGTGACATTTAAGGATCCAGAGGCAGCTATAAGAGCATGTCAGAATCCATCTCCAGTTATTGATGGAAGAAGAGCAAATTGCAATATTGCTTCTCTTGGTGCTAACAAGAATCGATCACTAACTCTTCAGCATGGAAGGTTTAGGCCTCCACATGGAGTGGTACCATCAGTTCCTTATCATGGTTCTTCATCCACAGTTTTCCATCAACCCACTAGGCAGTACACATTTCCTTATTCAGCATATTCTGGATATTCACAAGACACATTGTATCCTGCGAACTATTACAATGTCTATGGAGTTCAACAATATTCACCTTACTACCCATCTGTTGGAGCTTCTGGGGCAATGGGTTTGGTCCAAAATATGTACCCTTACTATGGTCAATATGCACAAAATATCCATGGTCATGGTTTTGGAGTTCAATACCCACAAATGACACAAATTCCAGTTTTGCCTCAGCATTATGGGTCACAAGGAATATTGACCCCTTCTTCAGTTCCAATCCCAACCATTAGTGCTGCAACAGTAACTGCAACCACAACTACTACAATAGCAGCACCTGTGGCAGTAACAAGGGTTGGTACTTCACAAGCCTCTGGAACAGATACTGAACAACAACATTCTACATCTTGA 840 0.4 MSQQRQPHMVSGNNQDQYNDTTFTKLFVGGLAWETQRETMRMYFEQFGEILEAVVITDKYTGRSKGYGFVTFKDPEAAIRACQNPSPVIDGRRANCNIASLGANKNRSLTLQHGRFRPPHGVVPSVPYHGSSSTVFHQPTRQYTFPYSAYSGYSQDTLYPANYYNVYGVQQYSPYYPSVGASGAMGLVQNMYPYYGQYAQNIHGHGFGVQYPQMTQIPVLPQHYGSQGILTPSSVPIPTISAATVTATTTTTIAAPVAVTRVGTSQASGTDTEQQHSTS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03982 279 SMART rrm1_1 25 97 IPR000504 GO:0003723
Mepo1g03982 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 116 IPR000504 GO:0003723
Mepo1g03982 279 PANTHER BOULE-RELATED 8 248 - -
Mepo1g03982 279 Gene3D - 1 113 IPR012677 -
Mepo1g03982 279 SUPERFAMILY RNA-binding domain, RBD 5 116 IPR035979 GO:0003676
Mepo1g03982 279 CDD RRM_RBM24_RBM38_like 24 99 - -
Mepo1g03982 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 83 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03982 Mepo-Chr1 46298228 46301226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03982 20 100 C2H2 Transcription Factor Family AT2G19380 43.210 1.65e-15 74.3