Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03980 ATGGGGAAGAAAGGTAGCAGTTCATGGTTAACTGCTGTGAAAAGAGCATTCAGATCTCCTACAAAAGATAGTGAAAAAAGAAGTGGTAGAAGAAGAGAAGATTGTGATCAAGAAGAAGATGAAGAAAAGAAGAGAGAAAAAAGAAGGTGGATTTTTAGGAAACCAGTGAATCATGAAACAGTGAATAATACTCAACAAAGTACACCAACAAAATTGAAGCATGATGTGGTTACTGTTACAAGTGTGGCTTCAAGGACAGATCAGGATGAGAAACATGCTCTTGCTGTGGCTATGGCTACAGCTGAGGCAGCAAGAGCTACTGCTCAAGCTGCTGTGGAAGTTGCAAGGTTGACTAAGCCTTCAAATCATGCTAGGGAGCATTATGCTGCTGTTGTGATTCAAACTTCTTTTAGAGGTTATTTGGCAAGAAGAGCACTTCGTGCGCTTAAGGGGTTAGTGAAGTTGCAAGCTTTAGTGAGAGGTCACAATGTTAGGAAGCAAGCAAAGATGACACTTAGGTGCATGCAAGCTCTTGTTAGAGTACAAGCAAGAGTTCTTGACCAGAGGATAAGGTCTACTTCACATGAAGGAAGTAGAAAATCAACCTTCAGTGACACGGCTAGTGTTTGGGATTCGCGGTATCTTCAAGACATTTCAGATAGGAAATCAATATCAAGAGAAGGAAGTAGTATTGCAGATGATTGGGATGATCGTCCACACACAGTTGAAGAAGTTAAGGCCATGCTGCAGCAGAGGAAAGAAGCAGCAATGAAGAGGGAAAAGTCCTTGTCCCAAGCTTTTTCACAACAGATTTGGAGAAATGGTAGGACATCATCAATTGGAAATGAAGATGAACTTGAAGAGAGACCAAAGTGGCTAGATAGATGGATGGCTACAAAGCCATGGGAGAATAGGGGAAGAGCTTCAACCGACCAGAGAGACTCTATTAAGACTGTGGAAGTCGATACGTCTCAACCTTATTCATATCTAGGAGCAAATTACAGAAGATCACATCCAAATTATCAATATAATCCACATCACCAACCACAAAGACATTCCATTGCTTCACCGCTCCATAGATCACACCAAAATGGATCCGTTCACAACCAATCCATCACTACTCCGTCTCCAGCAAAATCAAGACCTATTCAAGTCCGGTCGTCAAGCCCTCGTTGTGTTCGAGAAGATAGAAGCTACCACCACACCTCTCAAACCCCAAGCTTGAGGTCTAATTACCATTACAATGGGAACTTGTACCAAAACAGTAGAGGTGGAACAAGTAATGGTAGTAGTAATAGTATTGCTTCTACTACTGCTTCAGCTACATTGCCTAATTACATGCAAGCCACCGAGTCTGCGAAGGCTCGAATTCGGTCGCAGAGTGCGCCAAGGCAAAGGCCATCGACACCAGAGAGGGATAGATCCGGATCAGTAAAGAAAAGACTTTCTTTCCCTGCTCCTGATCCTTATAATGTAGGAGGAGTTGGTTATGGAAATTATGGACATAGTTTACGTAGTCCAAGCTTCAAGAGTGTGAATGTAGCAGCATCACATTATGGATTGGAGCAAAATTCCAATTACTCTTCATGTTGTACTGAGAGTCTCGGTGGCGAGGTTTCGCCTTCTTCAACCGGTGACCTTAGACGGTGGTTGAGATGA 1659 0.4286 MGKKGSSSWLTAVKRAFRSPTKDSEKRSGRRREDCDQEEDEEKKREKRRWIFRKPVNHETVNNTQQSTPTKLKHDVVTVTSVASRTDQDEKHALAVAMATAEAARATAQAAVEVARLTKPSNHAREHYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSTSHEGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDDRPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDSIKTVEVDTSQPYSYLGANYRRSHPNYQYNPHHQPQRHSIASPLHRSHQNGSVHNQSITTPSPAKSRPIQVRSSSPRCVREDRSYHHTSQTPSLRSNYHYNGNLYQNSRGGTSNGSSNSIASTTASATLPNYMQATESAKARIRSQSAPRQRPSTPERDRSGSVKKRLSFPAPDPYNVGGVGYGNYGHSLRSPSFKSVNVAASHYGLEQNSNYSSCCTESLGGEVSPSSTGDLRRWLR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03980 552 MobiDBLite consensus disorder prediction 303 322 - -
Mepo1g03980 552 MobiDBLite consensus disorder prediction 403 466 - -
Mepo1g03980 552 MobiDBLite consensus disorder prediction 327 491 - -
Mepo1g03980 552 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Mepo1g03980 552 MobiDBLite consensus disorder prediction 327 387 - -
Mepo1g03980 552 PANTHER IQ-DOMAIN 5-RELATED 1 486 - -
Mepo1g03980 552 MobiDBLite consensus disorder prediction 1 46 - -
Mepo1g03980 552 SMART iq_5 148 169 IPR000048 GO:0005515
Mepo1g03980 552 SMART iq_5 125 147 IPR000048 GO:0005515
Mepo1g03980 552 MobiDBLite consensus disorder prediction 18 46 - -
Mepo1g03980 552 FunFam IQ-domain 11 125 176 - -
Mepo1g03980 552 Gene3D - 123 185 - -
Mepo1g03980 552 MobiDBLite consensus disorder prediction 303 318 - -
Mepo1g03980 552 MobiDBLite consensus disorder prediction 533 552 - -
Mepo1g03980 552 Pfam Protein of unknown function (DUF4005) 389 498 IPR025064 -
Mepo1g03980 552 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Mepo1g03980 552 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Mepo1g03980 552 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03980 Mepo-Chr1 46274836 46278852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03980 1 552 IQD Protein Family AT1G01110 57.996 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03980 - - gmx:100786729 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03980 1 46274836 46278852 Mepo1g03980 1 46274836 46278852 ECH