Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03977 ATGATGAGTAATAAGGTACCACCAAGAACTCGTACTAGAGTAGGGAAGTACGAGATGGGAAAAACGATTGGTGAAGGAAGTTTTGCTAAGGTGAAGTTGGCTAAGAATGTTCAAAATGGAGATTCTGTTGCCATCAAAATTCTTGATCGTAATCATGTACTGAAACACAAGATGATGGATCAGTTGAAGAGAGAAATTTCAGCTATGAAGATGATTAATCATCCAAACGTTATCAAAATAATTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTTTTAGAGTTGGTTAATGGAGGAGAACTATTTGACAAAATTACTAAATTTGTGCTCAGTATCAGACATACGTCAGTCTTGGAGAGCTGCACGATACTGACAAATGCTACACATGGGAAACTTAACGAGGAGGAAGCAAGAAGTTATTTCCAACAACTAATCAATGCAGTTGATTATTGCCATAGTAGAGGAGTGTATCACAGAGATTTGAAGCCAGAGAATCTTCTTTTAGACACAAATGGTGTTCTTAAAGTTTCAGATTTTGGATTAAGTACATACTCACAGCAGGAGGATGAACTTCTCCGCACGGCATGCGGAACACCGAATTACGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTTCATCTGATATTTGGTCATGTGGAGTCATTCTCTTTGTACTAATGGCCGGGTACTTGCCGTTCGATGAGCCAAATCTAAGTGCACTGTATAGAAGAATTGGTAGAGCTGAGTTCAAATTTCCGTCTTGGTTTTCGCCCGGGGCAAAGAAACTGCTCAAGTCTATACTTAACCCGAACCCTCTAACGAGGATAAAGATTCCTGAAATCTTGGAAGATGAATGGTTCAGAAAAGGATACAAGCCGGCATGTTTTACCGAGGAAGAGGATGTCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCCAAGGAAAATCTTGTGACCGAGACCAAAGAGAAACCGGTGTCAATAAATGCTTTTGAGCTTATTTCTAGATCGGACAGCTTCAATCTCGACAATTTATTTGAAAAGGAAAAGGGGGTTGTAAAGCGCGAAACACATTTCGCTTCACAGCGTCCTGCAAATGAAATTATGTCTAAGATTGAGGAGGCTGCCAAACCTCTCGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAGGGTGATAAAAGTGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTCGAAGTGGCTCCCTCCTTGCATATGGTGGAGCTGCGAAAAACAGGCGGCGACACACTAGAGTTTCACAAGTTCTACAAAACCTTTTCATCAGGGTTGCAAGACATAGTGTGGAACACTGACAAAAAATGA 1374 0.4068 MMSNKVPPRTRTRVGKYEMGKTIGEGSFAKVKLAKNVQNGDSVAIKILDRNHVLKHKMMDQLKREISAMKMINHPNVIKIIEVMASKTKIYIVLELVNGGELFDKITKFVLSIRHTSVLESCTILTNATHGKLNEEEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDTNGVLKVSDFGLSTYSQQEDELLRTACGTPNYVAPEVLNDRGYVGSSSDIWSCGVILFVLMAGYLPFDEPNLSALYRRIGRAEFKFPSWFSPGAKKLLKSILNPNPLTRIKIPEILEDEWFRKGYKPACFTEEEDVNVDDVAAAFNDSKENLVTETKEKPVSINAFELISRSDSFNLDNLFEKEKGVVKRETHFASQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKTFSSGLQDIVWNTDKK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03977 457 SMART serkin_6 17 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03977 457 Gene3D Transferase(Phosphotransferase) domain 1 123 319 - -
Mepo1g03977 457 Gene3D Kinase associated domain 1, KA1 327 453 - -
Mepo1g03977 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Mepo1g03977 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 438 - -
Mepo1g03977 457 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Mepo1g03977 457 SUPERFAMILY Protein kinase-like (PK-like) 14 317 IPR011009 -
Mepo1g03977 457 Pfam Protein kinase domain 17 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03977 457 Pfam NAF domain 330 390 IPR004041 GO:0007165
Mepo1g03977 457 ProSiteProfiles Protein kinase domain profile. 17 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03977 457 CDD CIPK_C 334 447 - -
Mepo1g03977 457 FunFam Non-specific serine/threonine protein kinase 327 453 - -
Mepo1g03977 457 Gene3D Phosphorylase Kinase; domain 1 8 96 - -
Mepo1g03977 457 FunFam Non-specific serine/threonine protein kinase 123 298 - -
Mepo1g03977 457 ProSiteProfiles NAF domain profile. 328 352 IPR018451 GO:0007165
Mepo1g03977 457 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03977 Mepo-Chr1 46246783 46251803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03977 5 455 CBL-interacting serine-threonine protein kinases AT1G01140 71.397 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo1g03977 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03977 - - gmx:100794136 759.599