Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03972 ATGGCAGAAAATAATCCCAAGAAGGTTACCTTCTCCGAAAACGACGCTGCTTCAATCACACAACGGTATGGCACAAAGACCTTATTGACGTTGTTTCAGGAATTAGCAAATTACCCTGATACCAAATTTGATTGGAATGAATTGGTGAACAAAACTTCCACTGGTATTTCTAATGCCAGAGAGTATCAGATGCTATGGCGCCACTTGGCGTATGGTTATTCCTCGCCGCAAGATTTCAAACAAGAGGGCGATGAACCTATGGATGATGATAGTGACCTAGATTGCGAGCTGGAATCATTTCCTTCTGTACATGTTGAAGCTACATCAGAGTCCTCAGCATGTGCGAAGGTGATAATTGCTTCCCGCACGCTAGGTGAATCTACCCCTAGTAGCTCAACAATTGAGGCTCCAATGACTGTAAATTTTCCCGTTTACTGTTCATCTAGAACTTCAAAGGAAATTTCACAGCCCTCTAATTTGATGGAACAGACAAGCGTTACGTTTCCAGTTACTGTTCAGAGGCAGAAACTGCGAACTGTATCAGCAACAGATGCTTTAGAAACCAAGAGAACAGTTGGTGGTACCACAGCTTCCAAAAGGAAAAGAAAAGAATGGTCAGAGGAAGAGGACAATCAGCTAAGGGCTGCTGTTCAGAGATGCGGTGAAGGGAATTGGGTAGCCATGGCAAACGGAGACAGCTTTCCTAATAAGAGAAGTGCAACAGAATTGTCTCAGAGGTGGAGCGCTTTACGAAAGAAAGACGGCAGTGCCAATTCAGGATCCACTGTGACCAACACACAATATACTGCTGAACAGTTGGCAACTCGTCACTCCCTAAATTTAGCCCTTGACAAGCCATTCAAAAAGTTTACTGCTCCTAGAATGACTGATTCCGGTAGGACCTCCACACCAATTAAAAATCAAGAGCACTCACGTAATACGACGCAAGTCTCCACAGTTCGTAGTTCAGTGGCACCTCAACGTCCGTCTCAACAAGCTTGCGGTCCCCTGCGAAACCGAAATTGGCCTGTGAAGCATGCATCTCCACACATGGAGGCTAATTTTTGA 1068 0.4485 MAENNPKKVTFSENDAASITQRYGTKTLLTLFQELANYPDTKFDWNELVNKTSTGISNAREYQMLWRHLAYGYSSPQDFKQEGDEPMDDDSDLDCELESFPSVHVEATSESSACAKVIIASRTLGESTPSSSTIEAPMTVNFPVYCSSRTSKEISQPSNLMEQTSVTFPVTVQRQKLRTVSATDALETKRTVGGTTASKRKRKEWSEEEDNQLRAAVQRCGEGNWVAMANGDSFPNKRSATELSQRWSALRKKDGSANSGSTVTNTQYTAEQLATRHSLNLALDKPFKKFTAPRMTDSGRTSTPIKNQEHSRNTTQVSTVRSSVAPQRPSQQACGPLRNRNWPVKHASPHMEANF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03972 355 CDD SANT_TRF 203 252 - -
Mepo1g03972 355 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Mepo1g03972 355 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Mepo1g03972 355 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 337 - -
Mepo1g03972 355 MobiDBLite consensus disorder prediction 291 355 - -
Mepo1g03972 355 SMART sant 201 253 IPR001005 -
Mepo1g03972 355 MobiDBLite consensus disorder prediction 295 337 - -
Mepo1g03972 355 MobiDBLite consensus disorder prediction 191 210 - -
Mepo1g03972 355 Gene3D - 194 257 - -
Mepo1g03972 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Mepo1g03972 355 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03972 Mepo-Chr1 46204590 46211719 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo1g03972 Myb_DNA-binding 6.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03972 - - mtr:25500638 604.749