Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03967 ATGGGTTTGGTTGAAAAGAGTCCAAAGAGTCTTCATTTGCATAGACATCATCTTCAACATAAGCAAGAGTTCAAAGGTGTTCCAAAAGGGTTTATGGCTATAAAAGTTGGTCTAGGGGAAGAACAACAAAGGTTTGTTGTGCCGGTGATGTACTTCAATCACCCTCTTTTCATTCAACTATTGAAAGAGGCAGAAGAAGAATATGGATTTGATCAAAAAGGAACCATTACTATTCCTTGTCATGTTGAGGAATTTAGAAACGTTCGTGGTTTGATTGATAGAGACAAAAATCTTCATCAACATGTTGGTTGTTTTGGTTTATGA 324 0.3642 MGLVEKSPKSLHLHRHHLQHKQEFKGVPKGFMAIKVGLGEEQQRFVVPVMYFNHPLFIQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKNLHQHVGCFGL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03967 107 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
Mepo1g03967 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03967 Mepo-Chr1 46094895 46095693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03967 27 99 Calmodulin-binding Proteins AT5G20810 48.649 1.06e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03967 K14488 - gmx:111188139 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04243 3 51414797 51415586 Mepo1g03967 1 46094895 46095693 PCT