Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03960 ATGTCAACCAACATTGATAACCTCTGGATTCTTGCTCTTGCTTCCAAATGCACACAAGCAAACATTGCTTACTCTCTTTTGATCATGGCTTTACTTTGGATAACCATGACTTTCTTTTATTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTATTATTCCTCTAACTATTCCACCACAAAAACCAACAACAACCTTAATTCTTCTACACAACCTAGTACAACAACTTCCTCTTCAGTATTCATTCCTGGTCCAAAAGGGTACCCTCTATTTGGAAGCATGAACCTTATGTCTTCATCACTAGCACACCACCGTATAGCTTCCACAGCAAAAACATGCAAAGCCACAAGACTCATGGCTTTTAGTCTTGGTGACACAAGAGCCATAGTTACTTGCAATCCAGATGTTGCTAAAGAGATTCTCCATAGCTCTGTCTTTGCTGATCGTCCTATCAAAGAATCAGCTTATTCTCTTATGTTCAACCGTGCCATAGGATTCGCACCTTACGGTGTTTATTGGCGAACCCTTAGGAAAATCTCAACCAATCATCTTTTCTCACCCATGCAAATCAAATCATCTGGGCCGCAGAGGAGTGAAATTGCGACCCAGATGATTGACTTGTTCAGAAACCGTCATCTGCATGACGGTTTCTGTGTTCGCGATGTTTTGAAAAAAGCATCGCTTAATAACATGATGTGCTCTGTTTTTGGACAGAGGTTTAAGATTGATGAAGTTAATGAGAGAATGATGGAACTTAGTGGGTTGGTTGAACAAGGTTATGATTTGTTGGGTAGTCTTAATTGGGGTGATCATCTTCCATTTTTGAAAGATTTTGATGTTCAGAAAATCCGGTTCAGTTGTTCTGAATTAGTTCCTAAAGTGAACCGGTTCGTTGGTTCAATTATTTCCGACCACCGAGCCGACAAAAACCAAACCAACAAGGATTTTGTTCATGTTTTGCTCTCTCTTCAAGAACCAGATAAATTGTCTGACTCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACCGACACGGTGGCGGTTTTGATAGAGTGGATACTTGCAAGGTTGGTGATTCACCCTGACGTGCAAAAGAAGGTACAAACGGAGCTTGATGAGGTGGCAAGTGGTGAATCACGTGCTATAACGGAGGAGGATGTGGCAGCAATGGTTTATTTGCCTGCGGTAATTAAGGAGGTTTTAAGGTTGCATCCACCGGGCCCACTTCTTTCGTGGGCCCGATTAGCCATCACTGATACGACAATTGATGGGTATCATGTGCCAGCGGGGACTACTGCTATGGTTAATATGTGGGCCATATCTAGGGACCGTGATGTTTGGAGGAACCCACTTGAATTTAATCCGGAGAGGTTTATGAATGAAGGGAAGGAGTTTTCAGTACTTGGATCGGATCTTAGGTTGGCTCCGTTTGGATCGGGTAGGAGAAGTTGCCCCGGGAAGAATTTAGGTTTAGCCACTGTGACTTTTTGGGTGGCTAAACTCTTGCACGAGTTTGAATGGTTACCGTTGGATGAAGTGAATGGAGTTGATTTAACGGAGGTGCTAAGGCTTTCGTGTGAAATGGCTAACCCTCTTACCGTTCAAGTGCGCCCGAGGCGTTAG 1635 0.4367 MSTNIDNLWILALASKCTQANIAYSLLIMALLWITMTFFYWSHPGGPAWGKYYYSSNYSTTKTNNNLNSSTQPSTTTSSSVFIPGPKGYPLFGSMNLMSSSLAHHRIASTAKTCKATRLMAFSLGDTRAIVTCNPDVAKEILHSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRKISTNHLFSPMQIKSSGPQRSEIATQMIDLFRNRHLHDGFCVRDVLKKASLNNMMCSVFGQRFKIDEVNERMMELSGLVEQGYDLLGSLNWGDHLPFLKDFDVQKIRFSCSELVPKVNRFVGSIISDHRADKNQTNKDFVHVLLSLQEPDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVIHPDVQKKVQTELDEVASGESRAITEEDVAAMVYLPAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAISRDRDVWRNPLEFNPERFMNEGKEFSVLGSDLRLAPFGSGRRSCPGKNLGLATVTFWVAKLLHEFEWLPLDEVNGVDLTEVLRLSCEMANPLTVQVRPRR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03960 544 CDD CYP78 115 536 - -
Mepo1g03960 544 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 FunFam Cytochrome P450 78A5 75 543 - -
Mepo1g03960 544 Pfam Cytochrome P450 84 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Mepo1g03960 544 PANTHER CYTOCHROME P450 78A7-RELATED 1 544 - -
Mepo1g03960 544 Gene3D Cytochrome P450 70 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 227 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g03960 544 SUPERFAMILY Cytochrome P450 83 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03960 Mepo-Chr1 45973999 45976298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03960 1 544 Cytochrome P450 AT2G46660 63.206 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03960 K20619 - gmx:100798388 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03960 1 45973999 45976298 Mepo1g03960 1 45973999 45976298 ECH