Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03952 ATGCACATAAAAGTTCTAATGGAGGAAAAGCCATTCCCTGCATGGTCATGGTCAGTTGATGAGTGCTTGGAAGAGTATGGTGTGAAACTGGAAAAGGGTTTGAGTTCTAATGAGGTTCAGAAGCGTCGTGAGAAATACGGTTGGAATGAGCTAGCAAAAGAGAAGGGAAAACCGTTATGGAAACTAGTGTTAGAACAATTTGATGACATGTTGGTGAAGATACTTTTGGCAGCAGCCTTTATATCATTTCTTTTGGCATACTTTGAAGGAAGTGAATCTGGATTCGAGGCTTATGTAGAGCCGCTTGTGATCATTTTGATCTTGGTACTTAACGCAATCGTCGGAGTTTGGCAAGAGAACAATGCTGAAAAGGCTCTTGAAGCTCTTAAAGAGTTGCAATGTGAATCTATAAAAGTGTTAAGGGATGGATATTTTGTTCCTGATTTGCCTGCACGGGAGCTTGTTCCAGGCGATATTGTTGAGTTGCGCGTTGGAGATAAAGTTCCGGCTGACATGAGAGTTGCAGCTTTGAAAACATCAACACTAAGATTGGAACAAAGCTCGTTAACCGGAGAAGCAATGCCGGTTCTCAAAGGAACCAATCCTATTTTCTTGGATGATTGTGAATTGCAGGCCAAAGAAAATATGGTATTTGCAGGCACAACTGTTGTCAATGGAAGCTGTATTTGCATTGTTATTACCACAGCAATGAACACTGAAATCGGAAAGATACAGAAGCAAATACACGAGGCTTCGTTGGAGGAAAGCGATACTCCCTTGAAGAAGAAGTTAGACGAATTTGGTGGCAGGCTTACAACTTCTATCGGAATAGTTTGCCTTGTTGTTTGGATTATAAACTACAAAAATTTCATGTCTTGGGATGTTGTTGATGGATGGCCTACAAACATTCAATTTTCTTTTCAGAAATGCACTTACTATTTCAAAATTGCTGTTGCTCTTGCCGTGGCTGCAATTCCAGAAGGTCTTCCGGCGGTTATCACAACTTGTTTAGCACTCGGTACAAGGAAAATGGCACAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTTGAAACTTTGGGATGTACCACTGTGATTTGTTCAGATAAAACCGGTACATTGACGACAAATCAAATGTCTGCGACGGAGTTCTTTACTTTGGGAGGGAAAACAACTGCTTGTAGAGTCATTAGTGTTGAAGGGACAACATATGATCCAAAAGATGGAGGCATTGTTGATTGGACTTGTTATAATATGGATGCTAACTTGTTAGCCATGGCAGAAATTTGTGCTGTCTGTAATGATGCCGGTGTTTATTTTGATGGTCGCCTATTTCGAGCCACTGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGGTTTCCAGATACCAAATCAAGGAACAAAACTCACGATGCGCTAGTTGCGACAAACAACATGGTGGACTGCAACACTTTGAAGCTAGGTTGTTGTGAGTGGTGGAATAGAAGATCCAAAAGGGTAGCTACATTGGAGTTTGACCGCGTTAGGAAGTCGATGAGTGTTATTGTTCGCGAATCAGATGGACAAAACCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTATTGGAGCGAAGCTCGTATGTGCAACTTGCCGATGGATCTCTAGTTCCAATAGATGATCAATGTAGGGAGCTACTTCTCCAAAGACTCCATGAGATGAGTTCGAAGGGATTGCGTTGCTTAGGTTTGGCATGTAAGGATGAGTTGGGAGAATTTTCAGACTATTATGCAGACACTCATCCTGCACACAAGAAATTGCTTGATCCAACATACTATTCTTCCATTGAAAGTGATTTAGTTTTTGTTGGTGTTGTTGGTTTAAGAGACCCTCCTAGAGAGGAAGTTCATAAAGCAATTGAAGATTGTAAGCAAGCTGGTATTAGAGTGATGGTAATAACTGGAGATAATAAGTCAACAGCTGAGGCTATTTGTAAGGAAATCAAATTGTTCTCTAGAGAGGAGGATCTTACAGGTCAAAGTTTGACAGGTAAAGAATTCATGTCTCTTTCTCATTCAGAACAAGTTAAATTATTGTTGAGAAATGGCGGCAAAGTTTTCTCGCGAGCCGAGCCTAGACACAAGCAAGAAATTGTGAGATTACTGAAGGAAATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTTGCTGATATAGGAATTGCTATGGGAATAACCGGAACTGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAATTTTAGTACCATTGTCTCGGCTATCGCTGAGGGTCGCGCTATTTATAATAACATGAAAGCATTTATAAGGTACATGATATCATCAAATGTTGGGGAAGTTATATCCATATTCTTGACAGCTGCTTTGGGGATCCCAGAATGCATGATACCGGTACAACTTCTGTGGGTGAATTTGGTCACTGATGGTCCACCTGCAACAGCTCTTGGCTTCAACCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGAAAAAGTGACGATGCCCTTATAAGTGCCTGGGTTCTTTTCCGCTACCTAGTAATTGGTTCCTATGTGGGAATTGCAACAGTTGGAATTTTTGTATTGTGGTACACACAAGCATCTTTTCTTGGCATCAATCTTGTTAGTGATGGACACACAGTTATAGAATTGACACAGCTTCTCAACTGGAGGGAGTGTCCTTCATGGTCTAATTTCAATGTTTCTTCATTTGACGCTGGTGGCGGTCGCGTGATCGCGTTTTCAAATCCTTGTGACTATTTTTCAGTTGGCAAAGTTAAGGCAATGACTCTTTCTCTCTCTGTCTTGGTGGCAATTGAGATGTTCAATTCTTTGAATGCCCTATCAGAAGAGAATAGCTTGAGAACATTACCACCTTGGAGAAACCCTTGGCTTTTGGTAGCCATGACAATATCTTTTGCTCTACATTGTCTCATACTTTACATCCCTTTCCTCTCTGAGGTGTTTGGTGTTGCTCCACTAAGTTTGAAGGAGTGGTTTTTGGTGATTCTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTAGCGGTGAGGAGTCAAAGGAAGAAGACAAAAGAGAAAGAAGCATGA 3162 0.413 MHIKVLMEEKPFPAWSWSVDECLEEYGVKLEKGLSSNEVQKRREKYGWNELAKEKGKPLWKLVLEQFDDMLVKILLAAAFISFLLAYFEGSESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESIKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLRLEQSSLTGEAMPVLKGTNPIFLDDCELQAKENMVFAGTTVVNGSCICIVITTAMNTEIGKIQKQIHEASLEESDTPLKKKLDEFGGRLTTSIGIVCLVVWIINYKNFMSWDVVDGWPTNIQFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSATEFFTLGGKTTACRVISVEGTTYDPKDGGIVDWTCYNMDANLLAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDTKSRNKTHDALVATNNMVDCNTLKLGCCEWWNRRSKRVATLEFDRVRKSMSVIVRESDGQNRLLVKGAVESLLERSSYVQLADGSLVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICKEIKLFSREEDLTGQSLTGKEFMSLSHSEQVKLLLRNGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAIAEGRAIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKSDDALISAWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLVSDGHTVIELTQLLNWRECPSWSNFNVSSFDAGGGRVIAFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRTLPPWRNPWLLVAMTISFALHCLILYIPFLSEVFGVAPLSLKEWFLVILISAPVILIDEILKLAVRSQRKKTKEKEA 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03952 1053 Pfam Cation transporter/ATPase, N-terminus 15 82 IPR004014 -
Mepo1g03952 1053 Pfam E1-E2 ATPase 132 347 - -
Mepo1g03952 1053 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 793 1047 - -
Mepo1g03952 1053 Pfam Cation transporting ATPase, C-terminus 814 1039 IPR006068 -
Mepo1g03952 1053 FunFam Calcium-transporting P-type ATPase, putative 623 774 - -
Mepo1g03952 1053 Gene3D - 32 251 - -
Mepo1g03952 1053 PANTHER CALCIUM-TRANSPORTING ATPASE 18 1049 - -
Mepo1g03952 1053 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 374 625 IPR023299 GO:0000166
Mepo1g03952 1053 SMART Cation_ATPase_N_a_2 13 87 IPR004014 -
Mepo1g03952 1053 FunFam Calcium-transporting ATPase, putative 214 363 - -
Mepo1g03952 1053 FunFam Calcium-transporting ATPase, putative 114 249 - -
Mepo1g03952 1053 SUPERFAMILY HAD-like 365 833 IPR036412 -
Mepo1g03952 1053 PRINTS Sodium/potassium-transporting ATPase signature 982 1006 - -
Mepo1g03952 1053 PRINTS Sodium/potassium-transporting ATPase signature 360 381 - -
Mepo1g03952 1053 Pfam haloacid dehalogenase-like hydrolase 364 743 - -
Mepo1g03952 1053 PRINTS P-type cation-transporting ATPase superfamily signature 729 748 - -
Mepo1g03952 1053 PRINTS P-type cation-transporting ATPase superfamily signature 621 632 - -
Mepo1g03952 1053 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Mepo1g03952 1053 PRINTS P-type cation-transporting ATPase superfamily signature 367 381 - -
Mepo1g03952 1053 PRINTS P-type cation-transporting ATPase superfamily signature 643 653 - -
Mepo1g03952 1053 PRINTS P-type cation-transporting ATPase superfamily signature 753 765 - -
Mepo1g03952 1053 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 1046 IPR023298 -
Mepo1g03952 1053 Gene3D - 377 628 IPR023299 GO:0000166
Mepo1g03952 1053 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 377 628 - -
Mepo1g03952 1053 SFLD C1.7: P-type atpase like 348 782 - -
Mepo1g03952 1053 CDD P-type_ATPase_SERCA 15 1042 - -
Mepo1g03952 1053 Gene3D - 65 1042 - -
Mepo1g03952 1053 NCBIfam HAD-IC family P-type ATPase 304 388 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g03952 1053 NCBIfam HAD-IC family P-type ATPase 702 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g03952 1053 SFLD p-type atpase 348 782 IPR044492 -
Mepo1g03952 1053 SUPERFAMILY Calcium ATPase, transduction domain A 138 247 IPR008250 -
Mepo1g03952 1053 ProSitePatterns E1-E2 ATPases phosphorylation site. 369 375 IPR018303 -
Mepo1g03952 1053 Gene3D - 364 774 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03952 Mepo-Chr1 45866321 45871533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03952 8 1051 Primary Pumps ATPases(2) AT4G00900 78.877 0.0 1705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03952 K01537 - gmx:100792952 1875.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03952 1 45866321 45871533 Mepo1g03952 1 45866321 45871533 ECH