Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03948 ATGGAATTTGCGATAAAAATGGCTGTGTTGGGTTTTAAACCAGAAATGAATTCTGGTTCTGTTTTAGCATTGCATCCTACTGACAATATTTTCAGAACAAGGGAGCCTCCTGATTTTGAGGAGGACTTTGTAGAGAAAGATCCAACCGGCCGGTACGTAAGGTACAATGAAATCTTGGGCAGGGGTGCCTTCAAGACTGTTTATAGGGCATTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAGGATTGACGGTCTCTTACATTCAACAGATGATTTTGCAAAATTGTATTCTGAAGTTCATATATTGAAGTCCTTAAGACATGAAAATATCATTAAGTTCTACGATTCCTGGGTCGATGATAAGCAAAAAACCGTTAACATGATCACCGAACTCTTCACATCTGGAAACTTAAGACAGTACCGTAAGAAGCATAAGTATGTTGAAATGAAAGCCATAAAATGTTGGGCCAGGCAGATTCTTCAAGGCTTAGCATATCTTCACGGTCACAGGCCGCCTATTATTCACAGAGACTTGAAATGCGACAACATCTTTGTGAACGGAAACCAAGGAGAAGTTAAGATTGGTGATCTCGGATTGGCAATCGTCATGCAGCAGCCAACAGCTCGGAGTGTTATTGGGACGCCTGAGTTTATGGCTCCAGAATTATATGAAGAGGAGTACACTGAACTTGCTGACATATATTCTTTTGGAATGTCAATGTTGGAGATGGTTACTCTTGAGTACCCCTACAATGAATGCAATAACCCAGCTCAAATATTTAAGAAAGTTACCTCGGGCATCAAACCTGATTCCCTTAATAAGGTGAGTGACCCCCAAATTAAGGACTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCTGCAGAAGAGCTTCTTAAAGACCCATTTCTACAAATTGAGAGTCCAAAGGGTCCATTCCTGACTCCTTTTAAAACTCCAACAGCTACCGATATGCCAAAGTCGGCTCCATCTATGGACATCGATGCTGAGTACAAACAGTTTTATGGGAGTATGAGTACCTATGCTGAAAGCAACCAGAGAAGTCCACATTATCCTGTTTTTGAAGTCCAAAAGACTAATAAGAACAACGAGTTTAGATTAAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACAAGTGGTCGAGTACGGAATATACATTTTCTCTTTTACCTTGATGCAGATACTGCAGTCTCCGTGGCCTCGGAGATGGTTGAACATTTGGAGCTGGCAGATCATGATGTGGCTTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTTCCTTGGTGGAAACCTTCACCTGATCATAATTCAACAGGAGGAATAAGTCTTTCTAGTGGTTCTACAAATGTAGATTGCCAAAACTTAATGTCAAGCCCTTGGAGTTCTATCTTAACTAATGTTCCCTCCAAAAAAGTTAGTGGTCAAGATGTCTTTTCCGGGTTCGATACAATTTCTAGAGAAAGTTTTGAGACAGCTGGAAAGAGCTGTTTAAACGCTGATAACGCTACTTCTGAAGGTGCCTATGATACTTCTCATTGTTTGGTTAACTCTGAAGATCAATATTCACGAGGATCGGGAGCTTCTGAAATAGTTGTTGATGATGCTTCTATGAAAACCGACAATTCTCATGTTTCCAAAGTTATGGGTGTTGGATATTTTAAATGCCTAATAAGGTCGATACCCGAGGTTGAAGATGGGGACAAGTATTTCGAAGATTGTAAATTGCAGGCCACAGATTACAATGCTGGGGAAAGCAATGTGATCTCAGAATCATCAAACGTTCTGAGCTTGATAAGTAGTTGTTGTTCTTCCGTGTCTTCAACTGAAAAAGATAATGATCATGAGCTAAAGCTTGAACTTGATGCAATTGAGTCACAATATCAGCATTGGATTGAGGAGCTCACTAGAATGAAGTTGGAGGCATTGGAAGCCACCAGAAGGAAATGGATGTCCAAGAAGAAAATAGCTGTTCATTGA 2049 0.3997 MEFAIKMAVLGFKPEMNSGSVLALHPTDNIFRTREPPDFEEDFVEKDPTGRYVRYNEILGRGAFKTVYRAFDEVDGIEVAWNQVRIDGLLHSTDDFAKLYSEVHILKSLRHENIIKFYDSWVDDKQKTVNMITELFTSGNLRQYRKKHKYVEMKAIKCWARQILQGLAYLHGHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYTELADIYSFGMSMLEMVTLEYPYNECNNPAQIFKKVTSGIKPDSLNKVSDPQIKDFIEKCLVPASERLSAEELLKDPFLQIESPKGPFLTPFKTPTATDMPKSAPSMDIDAEYKQFYGSMSTYAESNQRSPHYPVFEVQKTNKNNEFRLKGTKNDDNSVSLTLRIADTSGRVRNIHFLFYLDADTAVSVASEMVEHLELADHDVAFIAELIDYLIMKLLPWWKPSPDHNSTGGISLSSGSTNVDCQNLMSSPWSSILTNVPSKKVSGQDVFSGFDTISRESFETAGKSCLNADNATSEGAYDTSHCLVNSEDQYSRGSGASEIVVDDASMKTDNSHVSKVMGVGYFKCLIRSIPEVEDGDKYFEDCKLQATDYNAGESNVISESSNVLSLISSCCSSVSSTEKDNDHELKLELDAIESQYQHWIEELTRMKLEALEATRRKWMSKKKIAVH 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03948 682 Coils Coil 644 664 - -
Mepo1g03948 682 ProSiteProfiles Protein kinase domain profile. 53 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03948 682 Gene3D - 388 468 - -
Mepo1g03948 682 Pfam Protein kinase domain 56 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03948 682 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 390 446 IPR024678 GO:0004674|GO:0005524
Mepo1g03948 682 SUPERFAMILY Protein kinase-like (PK-like) 55 311 IPR011009 -
Mepo1g03948 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Mepo1g03948 682 CDD STKc_WNK 51 310 - -
Mepo1g03948 682 SMART serkin_6 53 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03948 682 FunFam probable serine/threonine-protein kinase WNK9 136 315 - -
Mepo1g03948 682 FunFam Probable serine/threonine-protein kinase WNK1 38 134 - -
Mepo1g03948 682 Gene3D Transferase(Phosphotransferase) domain 1 136 314 - -
Mepo1g03948 682 Gene3D Phosphorylase Kinase; domain 1 38 134 - -
Mepo1g03948 682 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 35 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03948 Mepo-Chr1 45836955 45841589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03948 618 674 MAP Kinase Kinase Kinase AT1G64630 47.368 5.18e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo1g03948 Pkinase 3.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03948 K08867 - gmx:100272197 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03948 1 45836955 45841589 Mepo1g03948 1 45836955 45841589 ECH