Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03946 ATGGAAGGGTTATCTCCTAATTCATGTCCAAGGCAAGGATTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACCAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACACCTAATAATAGTTCATCAAAAATTCCTGACCTAAATCCACCAACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATACAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCCATGGAAAACTATCATCATAATCATGGTATGCCATCCTCATATGTTGAGATGCATAACAATAATGAATCATCTTCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCATCTAGAGGCATAAACCCTTATGCTAATAACAATAATTCTTTGATGCCAAACTCAAATGCTATTTATCCAACTGGATTTACCATGCAAGAAGTCAAACCTAGTCTTGGATTTACAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTCCAAGAAGGTGGTGGTGGTGGTGGAAGACTTTTGTTCCCATTTGGAGATGTTAATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATGGGTGAAGGATCATGGTAA 807 0.3693 MEGLSPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAFPSMENYHHNHGMPSSYVEMHNNNESSSSALDLLRSSMASRGINPYANNNNSLMPNSNAIYPTGFTMQEVKPSLGFTIDGINGNRSYDHVQVQEGGGGGGRLLFPFGDVNVNNKQLSTSGVEVEHNKDQQGNSTGYWNGMMGEGSW 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03946 268 MobiDBLite consensus disorder prediction 248 262 - -
Mepo1g03946 268 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Mepo1g03946 268 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g03946 268 MobiDBLite consensus disorder prediction 248 268 - -
Mepo1g03946 268 MobiDBLite consensus disorder prediction 78 116 - -
Mepo1g03946 268 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 166 IPR045174 GO:0003700|GO:0006355
Mepo1g03946 268 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Mepo1g03946 268 MobiDBLite consensus disorder prediction 65 119 - -
Mepo1g03946 268 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03946 Mepo-Chr1 45816261 45818379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03946 16 268 C2C2-Dof Transcription Factor Family AT3G61850 51.071 1.05e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo1g03946 zf-Dof 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03946 - - gmx:778110 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03946 1 45816261 45818379 Mepo1g03946 1 45816261 45818379 ECH