Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03943 ATGGGAAGAGCTCCTTGTTGTGCCAAAGTTGGATTGCACAAGGGTCCATGGACTACTAAAGAAGATGCATTGCTTACAAAATATGTTCAAGCTCATGGTGAAGGCCAATGGAAATCACTTCCTAAAAAAGCTGGGCTTCTTAGATGTGGGAAAAGTTGTAGACTTAGATGGATGAATTATCTTAGACCAGATATAAAGAGAGGTAACATAACTCCAGAAGAAGATGATCTTATAATAAGATTACATTCACTTCTTGGAAATAGGTGGTCACTTATAGCCGGAAGATTACCAGGACGAACAGACAATGAAATAAAGAACTACTGGAACACACACCTCCTAAAGAAGATGCAAAGAAATCAACAAACATGTGATGTTACAACAGATCATGATGAACAAGAACAACCCAAGAAAAAGAACAACAACAACAAAAAGAAGAAGAGAAACAACAAGGAGAAGAAAAGTGACAAGAAAAAAGGTACAAATAATGATGATAAAGAAGAAGAGAAAATCCAAGTTTATTTACCAAAAGCTATTAGAATAAAGGCTTTAAATTTACCAAGAACGGATAGTGGTTCATTTACATATGAATCAAATTCATCAAATGGTAGCCAACAAAAAGAAGGAACACAACAAGTGACAAACAACAATAATAACAACAACGTTGTTGTTTGTGAGGTTGGTGAGATGGGAGAAAATGACGGATTTGGGCATGACTATGACTATGACTTAGTCAACGTTGAAAGATTAGAGATGGAATGTGAGTCATATTTTGACACTTGTGGTGATCATGGAACATTAGATAGACTCTATGATGAATACTTGCAACTCTTGAACATGGATGTTTGCAACTACGAGTTCGATTCTTCTTTTGTTGAATCCTTCTTTGATTCAAACAATAATTAA 903 0.3522 MGRAPCCAKVGLHKGPWTTKEDALLTKYVQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLLKKMQRNQQTCDVTTDHDEQEQPKKKNNNNKKKKRNNKEKKSDKKKGTNNDDKEEEKIQVYLPKAIRIKALNLPRTDSGSFTYESNSSNGSQQKEGTQQVTNNNNNNNVVVCEVGEMGENDGFGHDYDYDLVNVERLEMECESYFDTCGDHGTLDRLYDEYLQLLNMDVCNYEFDSSFVESFFDSNNN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03943 300 Gene3D - 14 66 - -
Mepo1g03943 300 MobiDBLite consensus disorder prediction 189 217 - -
Mepo1g03943 300 MobiDBLite consensus disorder prediction 154 168 - -
Mepo1g03943 300 MobiDBLite consensus disorder prediction 119 168 - -
Mepo1g03943 300 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 212 - -
Mepo1g03943 300 CDD SANT 16 61 IPR001005 -
Mepo1g03943 300 Gene3D - 71 112 - -
Mepo1g03943 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo1g03943 300 SMART sant 66 114 IPR001005 -
Mepo1g03943 300 SMART sant 13 63 IPR001005 -
Mepo1g03943 300 MobiDBLite consensus disorder prediction 124 138 - -
Mepo1g03943 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo1g03943 300 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo1g03943 300 FunFam Myb transcription factor 11 67 - -
Mepo1g03943 300 CDD SANT 71 112 IPR001005 -
Mepo1g03943 300 MobiDBLite consensus disorder prediction 139 153 - -
Mepo1g03943 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo1g03943 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo1g03943 300 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo1g03943 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03943 Mepo-Chr1 45775716 45777248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03943 1 116 MYB Transcription Factor Family AT5G49330 74.138 2.33e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g03943 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03943 K09422 - gmx:100803345 337.035