Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03902 ATGAGTTCAAATGAAAAGAAATTTGTGAGATTTGAAGATTGGAAGTCAGAATCATCATCTTTTAATTTTTCACAATATGATTCTTCAATTGATGGATTTGAAAAAAGAAAATCTAAACCAAGTGTTTCTCCAGCAAAAAATAATGAATCGTTGCAAAAACCAGCTTCTAGGTGTAGTGTTCTTGATCCACAAGGTCCACTACTTCAGAAATGGAACAAGATCTTTGTTATAACATGTGTGATGGCAGTATCTATGGATCCATTATTCTTTTACATCCCTGTGATTGATGACCAGAGAAAATGCCTTAATTTGAATGGAACATTGAAGATTACTGCTAGTGTTCTTCGCACGTTTTTCGATCTTTTCTACATTATTCGCATCGTCTTTCAGTTTCGAACCGGGTTTATTGCACCTTCTTCGCGCATTTTTGGAAGGGGAGAGCCGGTTGATGATCCTTTTGCTATAGCAATGAGATACTTAAGTTCTCACTTCATCATTGACATTCTATCAATTCTTCCACTTCCTCAGATGGTGATTTTAGCTATGATTCCAATTCCACAAGGCTCAGTTCCATATATAACAAAGGATTGGTTGAAGTATACGATAATAACACAGTACGCGCCAAGACTTATGCGAATCTATACGTTGTTCAATGAAGTAACAAGCACTTCTGGTATATTAACCGAGACAGCGTGGGCCGGAGCTGCTTATAATCTCTTTCTTTATATGCTAGCAAGTCATGTTGTTGGAGCATTTTGGTATTTGTTTTCGATAGAATCAGAGTTGCGGTGTTGGCGCAGACGATTGAAGAACACACCATTCTTTGATGATTCCTATCTAAGCTGCGGACGAGTCAATTCAACACTTTTTTCAATTCTCAACAATTCTACTACTTGTCCTTACAAAGATCCTGATGATATCATTGACCCAACAGTTTTCAATTTTGGAATATTTATTGATGCTCTAACGTCTCGTGTGGTGGAGTTGAATACAAACTTTCATCATAAATTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGGCAGAACCTGAAGACAAGCACTTATATTGGGGAGATAATCTTTGCAATCTTCATTGCTGTCTTTGGATTGGTTCTATTTGCATTACTTATAGGAAACATGCAGAAATATCTACAATCTACAACTGTTAGAGTTGAAGAGATGAGAATCAAAAGGAGGGATGCAGAACAATGGATGTGCCACCGTATGCTACCGGATCACTTGAAGCAAAGAATTCGACGGTATGAACAATACAAATGGCAAGAAAATCGAGGTGTTGAAGAAGAGAAACTAATATGCAACCTCCCTAAAGATCTGAGAAGAGACATAAAGAGACATCTTTGCTTAGATTTACTTAAAAAAGTGCCAATTTTTGGCAACATGGATAAACAGTTGTTGGATGCAATGTGTGATAAACTGAAGCCGGTCCTTTATACCGAGAAAAGTTTCGTTGTTTGTGAAGGTGATCCAGTGGACGAAATGCTCTTCATCATGCGCGGAAAACTTAAGACTGCCACAACAAATGGTGGAAGAACTGGTTTCTTTAACTCGTCCGAACTCAAGGCTGGTGATTTTTGTGGAGAAGAGCTTCTAACATGGGCCTTGGATCCTACAACCTCTTCAAACTTACCTATTTCGACTAGTACAGTTGAAACTATTACGGAAGTTGAAGCTTTTGCTCTTTTGCATGATGACTTGAAGATTGTTGCTTCCCAATTTCGACGTCTTATTAACAGAAAACAGCTCCAGCACACTTTCAGGTTTTATTCCTTGCAATGGAGGACATGGGGAGCGCGGTTCATACAAGTAGTATGGCGTCAATACAGGGAAAAAAGGGCTGAGAAATTGTTACGTGAAACGGAAAAAAGGCAACAGAATGCTTCTGAAAATGAGGAAGAGTCTTCTTCACCAAGCATTGGTTCCACCATATATGTACAAAGGTTTGCATCCAATGCATTAAAGCATTTAAGAAGTGGCAAAAGAGTGACACAGACAAAGAAATTTCTACCACTTTTGCCTCGGAAACCAGCCGAGCCAGATTTCATCACTCAAAAAAATTAA 2094 0.3849 MSSNEKKFVRFEDWKSESSSFNFSQYDSSIDGFEKRKSKPSVSPAKNNESLQKPASRCSVLDPQGPLLQKWNKIFVITCVMAVSMDPLFFYIPVIDDQRKCLNLNGTLKITASVLRTFFDLFYIIRIVFQFRTGFIAPSSRIFGRGEPVDDPFAIAMRYLSSHFIIDILSILPLPQMVILAMIPIPQGSVPYITKDWLKYTIITQYAPRLMRIYTLFNEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESELRCWRRRLKNTPFFDDSYLSCGRVNSTLFSILNNSTTCPYKDPDDIIDPTVFNFGIFIDALTSRVVELNTNFHHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMCHRMLPDHLKQRIRRYEQYKWQENRGVEEEKLICNLPKDLRRDIKRHLCLDLLKKVPIFGNMDKQLLDAMCDKLKPVLYTEKSFVVCEGDPVDEMLFIMRGKLKTATTNGGRTGFFNSSELKAGDFCGEELLTWALDPTTSSNLPISTSTVETITEVEAFALLHDDLKIVASQFRRLINRKQLQHTFRFYSLQWRTWGARFIQVVWRQYREKRAEKLLRETEKRQQNASENEEESSSPSIGSTIYVQRFASNALKHLRSGKRVTQTKKFLPLLPRKPAEPDFITQKN 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03902 697 Coils Coil 621 644 - -
Mepo1g03902 697 SMART cnmp_10 468 599 IPR000595 -
Mepo1g03902 697 SUPERFAMILY cAMP-binding domain-like 397 586 IPR018490 -
Mepo1g03902 697 SUPERFAMILY Voltage-gated potassium channels 62 390 - -
Mepo1g03902 697 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 43 692 - -
Mepo1g03902 697 FunFam Cyclic nucleotide-gated ion channel 1 466 584 - -
Mepo1g03902 697 FunFam Cyclic nucleotide-gated ion channel 1 395 459 - -
Mepo1g03902 697 Pfam Ion transport protein 71 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo1g03902 697 Pfam Cyclic nucleotide-binding domain 489 578 IPR000595 -
Mepo1g03902 697 ProSiteProfiles cAMP/cGMP binding motif profile. 468 552 IPR000595 -
Mepo1g03902 697 MobiDBLite consensus disorder prediction 1 58 - -
Mepo1g03902 697 MobiDBLite consensus disorder prediction 15 29 - -
Mepo1g03902 697 CDD CAP_ED 468 600 IPR000595 -
Mepo1g03902 697 MobiDBLite consensus disorder prediction 43 57 - -
Mepo1g03902 697 Gene3D - 73 392 - -
Mepo1g03902 697 Gene3D Jelly Rolls 466 586 IPR014710 -
Mepo1g03902 697 Gene3D Helix hairpin bin 395 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03902 Mepo-Chr1 45350548 45355286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03902 1 692 Ion Channels AT4G01010 61.010 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03902 K05391 - gmx:100795201 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04207 3 51106117 51110656 Mepo1g03902 1 45350548 45355286 PCT