Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03900 ATGCAGGCAATAGAAGAACTTCAATTTGTGCAATCAACAGACTCAAACATGAAATCTCTTTTACCTGCAAATCTGAATGGTGATAACAATGAAGAATCAATTTTGTCTTCATACAATTCTTGGCTAGAAAACCATCCATCAGCATTGGAAATTTTTGAAAAAGTGATGAACATTGGAAGAGAGAAAAAGATTGTTGTGTTCTTGGATTATGATGGAACACTCTCTCAAATTGTTGATGATCCTGATAAAGCTTACATGAGTGATGGTATGCGTGTAGCTGTGCGTGAAGTTGCTAGTTATTTTCCTACTGCCATTATTAGTGGAAGGAGTAGGAACAAGGTTTATGAATTTGTGAAATTAAAAAATATTCATTATGCTGGAAGCCATGGCTTGGACATATCAACTTCACTGGGATCTTCCAAGTATCAAGATAAGAAGCATCAAACAAAGGGTGTCGATGAAAAGGGTAATGAAGTTGTACTTTATCATCCAGCAGAAGAATTTTTGCCAACAATCCAAGAGATAATTAAGATTTTGAAAGATAACATAAGAGTGATAAATGGCTCAACCATTGAGGATAATACGTTTTGTGTCACAGTACACTACCGCCGTGTGAAAAATAAAGAGGATGTTGAAGTTCTCAAAGAAATTGTCGAATCTATTATGAAAGGTTACCCTGATTTTCTCATATCAGGAGGGAAAGAGATTATGGAGATACGCCCAAATATAGCATGGAATAAAGGTGATGCTCTAATGTATTTTCTTGACACTCTTGGATATGACACCTTTGATGATGTTCTACCAATATACATTGGAGATGATAGAACAGATGAAGATGCTTTTAAGATTTTAAGACAAATTGGAGGAGGTTTTCCAATTGTTGTCTCTTCAATTGCTAAGAAGACATATGCTTCATATTCTCTGCGTGACCCTGCTGATGTTATGGCATTCTTGACACATTTAGCAAAATGGAAGAAGAACTTTGTTACATAA 993 0.3535 MQAIEELQFVQSTDSNMKSLLPANLNGDNNEESILSSYNSWLENHPSALEIFEKVMNIGREKKIVVFLDYDGTLSQIVDDPDKAYMSDGMRVAVREVASYFPTAIISGRSRNKVYEFVKLKNIHYAGSHGLDISTSLGSSKYQDKKHQTKGVDEKGNEVVLYHPAEEFLPTIQEIIKILKDNIRVINGSTIEDNTFCVTVHYRRVKNKEDVEVLKEIVESIMKGYPDFLISGGKEIMEIRPNIAWNKGDALMYFLDTLGYDTFDDVLPIYIGDDRTDEDAFKILRQIGGGFPIVVSSIAKKTYASYSLRDPADVMAFLTHLAKWKKNFVT 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03900 330 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 15 327 IPR044651 GO:0004805|GO:0005992
Mepo1g03900 330 NCBIfam trehalose-phosphatase 62 322 IPR003337 GO:0003824|GO:0005992
Mepo1g03900 330 SUPERFAMILY HAD-like 65 327 IPR036412 -
Mepo1g03900 330 Gene3D - 165 329 IPR023214 -
Mepo1g03900 330 Gene3D - 64 156 IPR023214 -
Mepo1g03900 330 FunFam Trehalose 6-phosphate phosphatase 165 242 - -
Mepo1g03900 330 Pfam Trehalose-phosphatase 67 311 IPR003337 GO:0003824|GO:0005992
Mepo1g03900 330 NCBIfam HAD-IIB family hydrolase 66 287 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03900 Mepo-Chr1 45308950 45313329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03900 62 322 Trehalose Biosynthesis Gene Families AT1G23870 25.455 6.30e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03900 K01087 - cam:101508225 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03900 1 45308950 45313329 Mepo1g03900 1 45308950 45313329 ECH