Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03891 ATGAAAGAGAACATTAAGTGTGAAGAAATTGGTCTCATTGGTGAACTAATGCAAGGTGAAGAGCTAGCAAAGAAGCTTTATGACCAACTTTTCTCTCCATCATCACCATCATCATCAACATCATCATCATCATCATCAACATCAACTTCATCAGATGAAGTCTTAATTGACAAGTTAATTTTGTCCATTGAGGCAGCAATAGCCATGGCAAAGGGTAATGAGGGAAAAATCAAGACAAACAATGTAAACATGATGGATTCTCATTGTTCAAATGGAAGCCCTAAAAGTGAGGTCCAAGACTCAAAGTTCAAGCACAAACATGTGTCCAAGAAAAGAAAAACAGAGCCTAAGTGGACCGAGCAAGTGAAGGTATATTCTGGAACAGCAGCAGAAGGGTCTGTGGAGGATGGCTATAGCTGGAGAAAGTATGGACAAAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGACATGCACAAGGTTGTCTAGCTACTAAGCAAGTGCAAAAATCAGATGAAGATGAAATGACATGTGAGATAACCTACAAAGGAAGACACACATGCACCCAATCTAACAAGACACTCCCATCAAAAGCAAAGTTGAAATTTGGACAAAATAAATCACAATCCAATCAAAATATTCAACCACAAGAAGAGAAAATTCAACCACCTCAAGAAACAATTTTCTCTTTAGACAACAAGGAGGATATATTTCAATCATTCAATTTTTCCTCTCCATCAATAGGATCTGAAAATGAAGATAACAACATATTTTTAGAGACCATGATTGAAAACAATTTCATGGAAAATGAGGATAACAATATATTCTCAGAATCAAACATTTTCTGCTTGTCATCACTATTGGATTTGGACAGCACTGGACTAGGCCCAAGTGAGAGTAACATCACTGAGATAATTTCAGGCCCAAATTCTATTGCCAATTCCCCAATGGATTTTGATCTCTATAATGACATAAATTTCGACATGGATGATTTCTCTATCAACACACAAGAACTTTGCTATTGA 1044 0.3669 MKENIKCEEIGLIGELMQGEELAKKLYDQLFSPSSPSSSTSSSSSSTSTSSDEVLIDKLILSIEAAIAMAKGNEGKIKTNNVNMMDSHCSNGSPKSEVQDSKFKHKHVSKKRKTEPKWTEQVKVYSGTAAEGSVEDGYSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQKSDEDEMTCEITYKGRHTCTQSNKTLPSKAKLKFGQNKSQSNQNIQPQEEKIQPPQETIFSLDNKEDIFQSFNFSSPSIGSENEDNNIFLETMIENNFMENEDNNIFSESNIFCLSSLLDLDSTGLGPSESNITEIISGPNSIANSPMDFDLYNDINFDMDDFSINTQELCY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03891 347 Gene3D WRKY domain 119 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g03891 347 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g03891 347 MobiDBLite consensus disorder prediction 89 115 - -
Mepo1g03891 347 ProSiteProfiles WRKY domain profile. 129 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g03891 347 Pfam WRKY DNA -binding domain 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g03891 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 317 IPR044810 GO:0003700
Mepo1g03891 347 MobiDBLite consensus disorder prediction 209 228 - -
Mepo1g03891 347 MobiDBLite consensus disorder prediction 30 49 - -
Mepo1g03891 347 FunFam WRKY transcription factor 53 120 197 - -
Mepo1g03891 347 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03891 Mepo-Chr1 45214157 45217216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03891 8 271 WRKY Transcription Factor Family AT2G46400 36.957 5.39e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g03891 WRKY 6.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03891 - - psat:127076062 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03891 1 45214157 45217216 Mepo1g03891 1 45214157 45217216 ECH
Mepo3g04199 3 51032764 51035003 Mepo1g03891 1 45214157 45217216 PCT